RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 NLRP12P59046 1061 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 SRSF5Q13243 272 aaKnown RBP16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 TXNDC8Q6A555 127 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 DGLUCYQ7Z3D6 616 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 CMTM8Q8IZV2 173 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 SPEM1Q8N4L4 309 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 C2orf15Q8WU43 125 aaKnown RBP16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 ZNF560Q96MR9 790 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 FAM126AQ9BYI3 521 aaPredicted RBP16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 DDX43Q9NXZ2 648 aaKnown RBP16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 GTF3C4Q9UKN8 822 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 KIF26AQ9ULI4 1882 aaPredicted RBP16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 FRYLO94915 3013 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 HRO43593 1189 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 STX6O43752 255 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 HUS1O60921 280 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 LDHAP00338 332 aaKnown RBP16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 HOXD13P35453 343 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 PNPLA4P41247 253 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 TSPY1Q01534 308 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 SMARCB1Q12824 385 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 FOXD4L5Q5VV16 416 aaPredicted RBP16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 RALGPS2Q86X27 583 aaPredicted RBP16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 CELF5Q8N6W0 485 aaKnown RBP16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 LINC00301Q8NCQ3 95 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 OR5B17Q8NGF7 314 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 RIN3Q8TB24 985 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 FOXD4L4Q8WXT5 416 aaPredicted RBP16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 USP13Q92995 863 aaPredicted RBP16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 GCNAQ96QF7 691 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 PKMYT1Q99640 499 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 ACBD6Q9BR61 282 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 MTMR12Q9C0I1 747 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 PARD6AQ9NPB6 346 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 SNX9Q9Y5X1 595 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 DMXL1Q9Y485 3027 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 PTPRJQ12913 1337 aa16.7■□□□□ 0.26
CLNS1A-210ENST00000528364 ZNF638Q14966 1978 aaKnown RBP16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 NUP210Q8TEM1 1887 aaPredicted RBP16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 DENND4CQ5VZ89 1909 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 OTOL1A6NHN0 477 aaPredicted RBP16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 K7ESF4 209 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 ATP2C2O75185 946 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 NRLP54845 237 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 RBP5P82980 135 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 LRRC32Q14392 662 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 PUM1Q14671 1186 aaKnown RBP eCLIP16.69■□□□□ 0.262e-12■■□□□ 12.6
CLNS1A-210ENST00000528364 STK38Q15208 465 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 SOWAHAQ2M3V2 549 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 ITPRIPL2Q3MIP1 535 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 INTS6LQ5JSJ4 861 aaKnown RBP16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 CBWD2Q8IUF1 395 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 GPD1LQ8N335 351 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 FAM83CQ9BQN1 747 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 HPS4Q9NQG7 708 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 DLL3Q9NYJ7 618 aa16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 MORC2Q9Y6X9 1032 aaPredicted RBP16.69■□□□□ 0.26
CLNS1A-210ENST00000528364 NCOR2Q9Y618 2525 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 LMO2P25791 158 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 ALCAMQ13740 583 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 E2F4Q16254 413 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 NFE2Q16621 373 aaPredicted RBP16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 DGKKQ5KSL6 1271 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 PKN3Q6P5Z2 889 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 PRR23BQ6ZRT6 265 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 CCDC65Q8IXS2 484 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 LRRC52Q8N7C0 313 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 CHFRQ96EP1 664 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 MSANTD3Q96H12 275 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 CYP2S1Q96SQ9 504 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 IER2Q9BTL4 223 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 BACH2Q9BYV9 841 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 ZSCAN16Q9H4T2 348 aaPredicted RBP16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 EBF3Q9H4W6 596 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 TMEM206Q9H813 350 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 INTS13Q9NVM9 706 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 POLR3BQ9NW08 1133 aaPredicted RBP16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 THG1LQ9NWX6 298 aaKnown RBP16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 GDAP2Q9NXN4 497 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 ITGA11Q9UKX5 1188 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 USP18Q9UMW8 372 aa16.68■□□□□ 0.26
CLNS1A-210ENST00000528364 K7ELQ4 463 aaPredicted RBP16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 GABRDO14764 452 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 SPTLC2O15270 562 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 TADA3O75528 432 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 TMEM191BP0C7N4 346 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 CSH1P0DML2 217 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 CSH2P0DML3 217 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 ARSAP15289 507 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 AVPR1AP37288 418 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 PLCB2Q00722 1185 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 MYL7Q01449 175 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 SPEM2Q0P670 501 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 CCINQ13939 588 aa16.67■□□□□ 0.26
CLNS1A-210ENST00000528364 PPP2R5DQ14738 602 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms