RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	ATP2C2	O75185	946 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	TACC1	O75410	805 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	AKAP3	O75969	853 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	VNN1	O95497	513 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	C4BPA	P04003	597 aa	Known RBP	12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	NR2F2	P24468	414 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	GABRR2	P28476	465 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	ATIC	P31939	592 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	CLCN5	P51795	746 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	AP3M2	P53677	418 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	TNNC1	P63316	161 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	BIRC3	Q13489	604 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	TRPC3	Q13507	836 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	NCOA4	Q13772	614 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	WDR72	Q3MJ13	1102 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	ZACN	Q401N2	412 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	CFAP221	Q4G0U5	840 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	C1orf220	Q5T0J3	134 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	FAM171B	Q6P995	826 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	STKLD1	Q8NE28	680 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	SPATA20	Q8TB22	786 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	FAM200A	Q8TCP9	573 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	ERCC4	Q92889	916 aa	Predicted RBP	12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	SYAP1	Q96A49	352 aa	Predicted RBP	12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	MKNK1	Q9BUB5	465 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	SLITRK6	Q9H5Y7	841 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	VRTN	Q9H8Y1	702 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	TBC1D17	Q9HA65	648 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	TRPV4	Q9HBA0	871 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	ZFP14	Q9HCL3	533 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	CRTAC1	Q9NQ79	661 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	CDH9	Q9ULB4	789 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	FRMD4B	Q9Y2L6	1034 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	NOTCH4	Q99466	2003 aa		12.59	□□□□□ -0.39
PSMC3-205	ENST00000528362	MAPK13	O15264	365 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	PHACTR2	O75167	634 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	FGF19	O95750	216 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	PDGFRB	P09619	1106 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	HMGA1	P17096	107 aa	Known RBP	12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	AOC1	P19801	751 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	CYP2F1	P24903	491 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	VIPR2	P41587	438 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	CYP4F8	P98187	520 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	TCF15	Q12870	199 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	GRM2	Q14416	872 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	DDR2	Q16832	855 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	ZNF699	Q32M78	642 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	SDHAF4	Q5VUM1	108 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	VIT	Q6UXI7	678 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	TMEM150A	Q86TG1	271 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	MYLPF	Q96A32	169 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	ELMO3	Q96BJ8	720 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	RSPRY1	Q96DX4	576 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	DOCK6	Q96HP0	2047 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	TIGD1	Q96MW7	591 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	GSDMA	Q96QA5	445 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	GPR88	Q9GZN0	384 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	ATXN3L	Q9H3M9	355 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	SMYD3	Q9H7B4	428 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	RMND1	Q9NWS8	449 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	NXF1	Q9UBU9	619 aa	Known RBP	12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	PCDHA5	Q9Y5H7	936 aa		12.58	□□□□□ -0.4
PSMC3-205	ENST00000528362	IKBKB	O14920	756 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	GADD45B	O75293	160 aa	Predicted RBP	12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	FAM163B	P0C2L3	166 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	TRIM49	P0CI25	452 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	TRIM49C	P0CI26	452 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	CDC25C	P30307	473 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	GNL1	P36915	607 aa	Predicted RBP	12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	PRCP	P42785	496 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	MAGEA11	P43364	429 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	VAMP7	P51809	220 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	NHLH1	Q02575	133 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	ADAM9	Q13443	819 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	EDRF1	Q3B7T1	1238 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	COBLL1	Q53SF7	1204 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	GPR158	Q5T848	1215 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	PHLDB3	Q6NSJ2	640 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	SV2A	Q7L0J3	742 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	FAM186B	Q8IYM0	893 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	OR6B3	Q8NGW1	331 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	SMARCE1	Q969G3	411 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	EEF2KMT	Q96G04	330 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	PRRX2	Q99811	253 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	SNX25	Q9H3E2	840 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	DPEP3	Q9H4B8	488 aa		12.57	□□□□□ -0.4
PSMC3-205	ENST00000528362	HEPACAM2	A8MVW5	462 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	STK25	O00506	426 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	GALR2	O43603	387 aa	Predicted RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	TADA3	O75528	432 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	SMC2	O95347	1197 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	PRAMEF12	O95522	483 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	F11	P03951	625 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	CSH1	P0DML2	217 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	CSH2	P0DML3	217 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	BDNF	P23560	247 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	RPL13	P26373	211 aa	Known RBP	12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms