RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CEP295NLQ96MC4 621 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 LPIN3Q9BQK8 851 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 MTMR12Q9C0I1 747 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 CHRDQ9H2X0 955 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 IL21Q9HBE4 155 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 AGPAT3Q9NRZ7 376 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 THG1LQ9NWX6 298 aaKnown RBP15.24■□□□□ 0.03
CAPN1-212ENST00000527887 UXTQ9UBK9 157 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-212ENST00000527887 SIX4Q9UIU6 781 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 RCOR1Q9UKL0 485 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 PCDHA7Q9UN72 937 aa15.24■□□□□ 0.03
CAPN1-212ENST00000527887 MYH15Q9Y2K3 1946 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 FAM186AA6NE01 2351 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 TGFB1I1O43294 461 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 KINO60870 393 aaKnown RBP15.23■□□□□ 0.03
CAPN1-212ENST00000527887 HOXD13P35453 343 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 NRLP54845 237 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 MAPRE1Q15691 268 aaKnown RBP15.23■□□□□ 0.03
CAPN1-212ENST00000527887 BMT2Q1RMZ1 405 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-212ENST00000527887 CBWD2Q8IUF1 395 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 C12orf56Q8IXR9 622 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 CEP57L1Q8IYX8 460 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 ADGRF2Q8IZF7 708 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 CELF5Q8N6W0 485 aaKnown RBP15.23■□□□□ 0.03
CAPN1-212ENST00000527887 XXYLT1Q8NBI6 393 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 GLIS3Q8NEA6 775 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 GOLGA5Q8TBA6 731 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 BPIFB1Q8TDL5 484 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 GIPC2Q8TF65 315 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 SCFD1Q8WVM8 642 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 HPS3Q969F9 1004 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 HPDLQ96IR7 371 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 ZSCAN32Q9NX65 697 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 R4GN57 208 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 FRYLO94915 3013 aa15.23■□□□□ 0.03
CAPN1-212ENST00000527887 F11P03951 625 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 HMGA1P17096 107 aaKnown RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 AVPR1AP37288 418 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 KPNA1P52294 538 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 CSTF1Q05048 431 aaKnown RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 PSMD2Q13200 908 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 LRRC32Q14392 662 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 PSMD6Q15008 389 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 SNRNP35Q16560 246 aaKnown RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 SOWAHAQ2M3V2 549 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 STXBP5Q5T5C0 1151 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 FOXD4L5Q5VV16 416 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 FAM171BQ6P995 826 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 TRAPPC11Q7Z392 1133 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 CMTM8Q8IZV2 173 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 ZBTB44Q8NCP5 570 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 OR5B17Q8NGF7 314 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 TMEM174Q8WUU8 243 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 ATRIPQ8WXE1 791 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 FOXD4L4Q8WXT5 416 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 MRPS31Q92665 395 aaKnown RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 NELL1Q92832 810 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 RSPRY1Q96DX4 576 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 TRMT2BQ96GJ1 504 aaKnown RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 MYRFLQ96LU7 910 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 PKMYT1Q99640 499 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 PI4K2AQ9BTU6 479 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 SLC46A2Q9BY10 475 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 KIF9Q9HAQ2 790 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 LMAN1LQ9HAT1 526 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 PRMT8Q9NR22 394 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 TMLHEQ9NVH6 421 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 USP25Q9UHP3 1055 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 GTF3C4Q9UKN8 822 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 CDH9Q9ULB4 789 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 NDRG2Q9UN36 371 aaKnown RBP15.22■□□□□ 0.03
CAPN1-212ENST00000527887 GVINP1Q7Z2Y8 2422 aa15.22■□□□□ 0.03
CAPN1-212ENST00000527887 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 NOL4O94818 638 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 MYL1P05976 194 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 CHRNB1P11230 501 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 TNNI1P19237 187 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 CCNE1P24864 410 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 MAGEA11P43364 429 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 CCR3P51677 355 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 NLRP12P59046 1061 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 KNOP1Q1ED39 458 aaKnown RBP15.21■□□□□ 0.03
CAPN1-212ENST00000527887 DGKKQ5KSL6 1271 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 VSTM1Q6UX27 236 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 MON1AQ86VX9 555 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 SPATA2LQ8IUW3 424 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-212ENST00000527887 SYNPOQ8N3V7 929 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 RUBCNQ92622 972 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 EHD2Q9NZN4 543 aa15.21■□□□□ 0.03
CAPN1-212ENST00000527887 NCANO14594 1321 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 F5P12259 2224 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 TACC1O75410 805 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 STAU1O95793 577 aaKnown RBP15.2■□□□□ 0.02
CAPN1-212ENST00000527887 WARSP23381 471 aaKnown RBP15.2■□□□□ 0.02
CAPN1-212ENST00000527887 CMA1P23946 247 aa15.2■□□□□ 0.02
CAPN1-212ENST00000527887 CYP2F1P24903 491 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms