RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 SDHAF4Q5VUM1 108 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 ZNF852Q6ZMS4 543 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 OSTM1Q86WC4 334 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 ARID3BQ8IVW6 561 aaPredicted RBP20.68■□□□□ 0.9
CAPN1-211ENST00000527739 IRF7Q92985 503 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 CGRRF1Q99675 332 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 BCO2Q9BYV7 579 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 CGNQ9P2M7 1197 aaKnown RBP20.68■□□□□ 0.9
CAPN1-211ENST00000527739 MAGED2Q9UNF1 606 aaPredicted RBP20.68■□□□□ 0.9
CAPN1-211ENST00000527739 R4GN57 208 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 SCN1AP35498 2009 aa20.68■□□□□ 0.9
CAPN1-211ENST00000527739 GVINP1Q7Z2Y8 2422 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 MYH15Q9Y2K3 1946 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 HCRTO43612 131 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 PHACTR2O75167 634 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 CYP2F1P24903 491 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 PCSK1P29120 753 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 CDC25CP30307 473 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 STK4Q13043 487 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 TRPC3Q13507 836 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 DDR2Q16832 855 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 BMT2Q1RMZ1 405 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 INTS6LQ5JSJ4 861 aaKnown RBP20.67■□□□□ 0.9
CAPN1-211ENST00000527739 SPATA2LQ8IUW3 424 aaPredicted RBP20.67■□□□□ 0.9
CAPN1-211ENST00000527739 MFSD6LQ8IWD5 586 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 DEPDC1BQ8WUY9 529 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 E2F7Q96AV8 911 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 SCAND2PQ9GZW5 306 aaPredicted RBP20.67■□□□□ 0.9
CAPN1-211ENST00000527739 TRPV4Q9HBA0 871 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 LTB4R2Q9NPC1 389 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 DLGAP2Q9P1A6 1054 aa20.67■□□□□ 0.9
CAPN1-211ENST00000527739 CST3P01034 146 aaPredicted RBP20.66■□□□□ 0.9
CAPN1-211ENST00000527739 PDGFRBP09619 1106 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 NDUFA8P51970 172 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 PSMD2Q13200 908 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 BECN1Q14457 450 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 SCN4BQ8IWT1 228 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 FSIP1Q8NA03 581 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 STKLD1Q8NE28 680 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 GOLGA5Q8TBA6 731 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 DNASE1L2Q92874 299 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 CCDC47Q96A33 483 aaKnown RBP20.66■□□□□ 0.9
CAPN1-211ENST00000527739 GDPD2Q9HCC8 539 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 HPSEQ9Y251 543 aa20.66■□□□□ 0.9
CAPN1-211ENST00000527739 MRPS17Q9Y2R5 130 aaKnown RBP20.66■□□□□ 0.9
CAPN1-211ENST00000527739 ANK1P16157 1881 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 MYBPHLA2RUH7 354 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 ATP2C2O75185 946 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 RPN1P04843 607 aaKnown RBP20.65■□□□□ 0.9
CAPN1-211ENST00000527739 GLULP15104 373 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 RPL10AP62906 217 aaKnown RBP20.65■□□□□ 0.9
CAPN1-211ENST00000527739 DPH6Q7L8W6 267 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 C1orf210Q8IVY1 113 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 SPATA18Q8TC71 538 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 CSGALNACT1Q8TDX6 532 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 RSPRY1Q96DX4 576 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 NELL2Q99435 816 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 SYT15Q9BQS2 421 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 DDX23Q9BUQ8 820 aaKnown RBP20.65■□□□□ 0.9
CAPN1-211ENST00000527739 SNX25Q9H3E2 840 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 TASP1Q9H6P5 420 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 SPATA6Q9NWH7 488 aaPredicted RBP20.65■□□□□ 0.9
CAPN1-211ENST00000527739 NDRG2Q9UN36 371 aaKnown RBP20.65■□□□□ 0.9
CAPN1-211ENST00000527739 WDR87Q6ZQQ6 2873 aa20.65■□□□□ 0.9
CAPN1-211ENST00000527739 MAN2B1O00754 1011 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 GABRDO14764 452 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 NCAM2O15394 837 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 LMO2P25791 158 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 ID4P47928 161 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 CASP4P49662 377 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 PSMC1P62191 440 aaKnown RBP20.64■□□□□ 0.89
CAPN1-211ENST00000527739 TNNC1P63316 161 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 BIRC3Q13489 604 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 CCDC142Q17RM4 750 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 C12orf56Q8IXR9 622 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 KIAA0895Q8NCT3 520 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 ZNF516Q92618 1163 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 SMG9Q9H0W8 520 aaKnown RBP20.64■□□□□ 0.89
CAPN1-211ENST00000527739 IL21Q9HBE4 155 aa20.64■□□□□ 0.89
CAPN1-211ENST00000527739 NXF1Q9UBU9 619 aaKnown RBP20.64■□□□□ 0.89
CAPN1-211ENST00000527739 NCANO14594 1321 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 MYL1P05976 194 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 PRR29P0C7W0 189 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 CSH1P0DML2 217 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 CSH2P0DML3 217 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 TARSP26639 723 aaKnown RBP20.63■□□□□ 0.89
CAPN1-211ENST00000527739 GNL1P36915 607 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-211ENST00000527739 KPNA1P52294 538 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-211ENST00000527739 WDR72Q3MJ13 1102 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 OR6B3Q8NGW1 331 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 TTC8Q8TAM2 541 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 KBTBD7Q8WVZ9 684 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 MKNK1Q9BUB5 465 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 SLC46A2Q9BY10 475 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 OSBPL6Q9BZF3 934 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 ABCB6Q9NP58 842 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 MAGEC2Q9UBF1 373 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-211ENST00000527739 CDH9Q9ULB4 789 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 PIAS3Q9Y6X2 628 aa20.63■□□□□ 0.89
CAPN1-211ENST00000527739 ZNF292O60281 2723 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms