RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	ABLIM1	O14639	778 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	ZBTB24	O43167	697 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	TRAPPC3	O43617	180 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	OPA1	O60313	960 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	BUB1B	O60566	1050 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	DXO	O77932	396 aa	Known RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PROSC	O94903	275 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	TJP3	O95049	919 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	VNN1	O95497	513 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	EOMES	O95936	686 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	FTCD	O95954	541 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	TH	P07101	528 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	MME	P08473	750 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	UNG	P13051	313 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	CD58	P19256	250 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	TNFRSF8	P28908	595 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PCSK1	P29120	753 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	CDH5	P33151	784 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	SCNN1A	P37088	669 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	CTCF	P49711	727 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	ZNF132	P52740	706 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	GSC	P56915	257 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	CAV1	Q03135	178 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PRKCZ	Q05513	592 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	INCA1	Q0VD86	236 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	SMC1A	Q14683	1233 aa	Known RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	MESD	Q14696	234 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PTGIS	Q16647	500 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	NBPF20	Q3BBV1	942 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PRAMEF19	Q5SWL8	479 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	GJC2	Q5T442	439 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	CFAP58	Q5T655	872 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	NAA35	Q5VZE5	725 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	ARID2	Q68CP9	1835 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	POLN	Q7Z5Q5	900 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	NT5DC3	Q86UY8	548 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	SERINC5	Q86VE9	423 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	NPAS3	Q8IXF0	933 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	RCOR2	Q8IZ40	523 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	KRT222	Q8N1A0	295 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	RASGEF1C	Q8N431	466 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	LRRC57	Q8N9N7	239 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	C3orf20	Q8ND61	904 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	OR5B17	Q8NGF7	314 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	FEZF2	Q8TBJ5	459 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PLEKHO2	Q8TD55	490 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	STK32A	Q8WU08	396 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	KAT2B	Q92831	832 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	APBB2	Q92870	758 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	HAUS1	Q96CS2	278 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	CPB2	Q96IY4	423 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	HEXIM2	Q96MH2	286 aa	Known RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	ZSWIM1	Q9BR11	485 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PI4K2A	Q9BTU6	479 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	TLR10	Q9BXR5	811 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	OXCT2	Q9BYC2	517 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PARD6B	Q9BYG5	372 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	IKZF4	Q9H2S9	585 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	MED4	Q9NPJ6	270 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	ASNSD1	Q9NWL6	643 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	TRIM10	Q9UDY6	481 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	MTRF1L	Q9UGC7	380 aa	Known RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	NUB1	Q9Y5A7	615 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	PCDHA3	Q9Y5H8	950 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	ALG6	Q9Y672	507 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	DUSP10	Q9Y6W6	482 aa		6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718		V9GYY5	206 aa	Predicted RBP	6.63	□□□□□ -1.35
PABPC4-222	ENST00000527718	KPNA7	A9QM74	516 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	GPR25	O00155	361 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	TREH	O43280	583 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	B4GALT5	O43286	388 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	ZNF623	O75123	536 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	CILP	O75339	1184 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	RECQL4	O94761	1208 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	ZRANB2	O95218	330 aa	Known RBP eCLIP	6.62	□□□□□ -1.35	2e-10	■■■□□ 14.9
PABPC4-222	ENST00000527718	TBC1D8	O95759	1140 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	IGHA2	P01877	340 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	ASGR1	P07306	291 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	RHOXF2B	P0C7M4	288 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	HSPA8	P11142	646 aa	Known RBP	6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	KRT3	P12035	628 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	H2AFX	P16104	143 aa	Predicted RBP	6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	ACO1	P21399	889 aa	Known RBP	6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	MMP8	P22894	467 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	CTNNA1	P35221	906 aa	Known RBP	6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	THPO	P40225	353 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	TNFSF9	P41273	254 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	SSR1	P43307	286 aa	Known RBP	6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	ASPA	P45381	313 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	FNTA	P49354	379 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	ZNF135	P52742	658 aa	Predicted RBP	6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	LBX1	P52954	281 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	BCAT1	P54687	386 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	NOMO3	P69849	1222 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	ADAM17	P78536	824 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	CACNB2	Q08289	660 aa	Predicted RBP	6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	CALCOCO2	Q13137	446 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	MTA1	Q13330	715 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	ITGA7	Q13683	1181 aa		6.62	□□□□□ -1.35
PABPC4-222	ENST00000527718	CCL14	Q16627	93 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms