RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 VAMP7P51809 220 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 ENPEPQ07075 957 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 NCOA4Q13772 614 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 TEAD2Q15562 447 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 ZACNQ401N2 412 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 INTS8Q75QN2 995 aaKnown RBP28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 ERCC4Q92889 916 aaPredicted RBP28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 ELSPBP1Q96BH3 223 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 FUBP3Q96I24 572 aaKnown RBP eCLIP28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 KXD1Q9BQD3 176 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 SYT15Q9BQS2 421 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 SNX25Q9H3E2 840 aa28.21■■■□□ 2.11
TSPAN4-217ENST00000527644 A0A1W2PRU2 124 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 MYBPHLA2RUH7 354 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 GNL1P36915 607 aaPredicted RBP28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 GPC5P78333 572 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 MAPRE1Q15691 268 aaKnown RBP28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 TAF12Q16514 161 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 CFAP221Q4G0U5 840 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 FAM78AQ5JUQ0 283 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 SPATA2LQ8IUW3 424 aaPredicted RBP28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 FAM186BQ8IYM0 893 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 SIX5Q8N196 739 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 GPR152Q8TDT2 470 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 GIPC2Q8TF65 315 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 ZSWIM3Q96MP5 696 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 ASB16Q96NS5 453 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 MRPL45Q9BRJ2 306 aaKnown RBP28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 ZFP14Q9HCL3 533 aa28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 ZNF334Q9HCZ1 680 aaPredicted RBP28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 NXF1Q9UBU9 619 aaKnown RBP28.2■■■□□ 2.1
TSPAN4-217ENST00000527644 VNN1O95497 513 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 PDGFRBP09619 1106 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 KRT13P13646 458 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 CYP2F1P24903 491 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 AVPR2P30518 371 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 RPL10AP62906 217 aaKnown RBP28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 ZNF699Q32M78 642 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 C1orf220Q5T0J3 134 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 TANGO2Q6ICL3 276 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 C4orf50Q6ZRC1 276 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 GAREM2Q75VX8 874 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 SV2AQ7L0J3 742 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 OR6B3Q8NGW1 331 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 SMARCD2Q92925 531 aa28.19■■■□□ 2.1
TSPAN4-217ENST00000527644 ATP2C2O75185 946 aa28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 FCARP24071 287 aa28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 GABRR2P28476 465 aa28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 VCPP55072 806 aaKnown RBP28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 SGSM1Q2NKQ1 1148 aa28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 ZNF667Q5HYK9 610 aa28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 ATXN3LQ9H3M9 355 aa28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 SLITRK6Q9H5Y7 841 aa28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 TRPV4Q9HBA0 871 aa28.18■■■□□ 2.1
TSPAN4-217ENST00000527644 CETN3O15182 167 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 CDC25CP30307 473 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 CLCN5P51795 746 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 PSMC1P62191 440 aaKnown RBP28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 ASTLQ6HA08 431 aaPredicted RBP28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 ZSCAN18Q8TBC5 510 aaPredicted RBP28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 TAF4BQ92750 862 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 TSG101Q99816 390 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 MKNK1Q9BUB5 465 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 PLA2G2FQ9BZM2 168 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 CRTAC1Q9NQ79 661 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 MAGEC2Q9UBF1 373 aaPredicted RBP28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 CA14Q9ULX7 337 aa28.17■■■□□ 2.1
TSPAN4-217ENST00000527644 KRBA1A5PL33 1030 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 CLSTN1O94985 981 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 CSH1P0DML2 217 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 CSH2P0DML3 217 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 NPR3P17342 541 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 MAGEA11P43364 429 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 MCCD1P59942 119 aaPredicted RBP28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 PFKPQ01813 784 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 CCDC142Q17RM4 750 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 ARHGAP15Q53QZ3 475 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 ADSSL1Q8N142 457 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 FLCNQ8NFG4 579 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 MYCBPAPQ8TBZ2 947 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 GCNAQ96QF7 691 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 PRRX2Q99811 253 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 IL21Q9HBE4 155 aa28.16■■■□□ 2.1
TSPAN4-217ENST00000527644 P4HA1P13674 534 aa28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 HMGA1P17096 107 aaKnown RBP28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 GPR15P49685 360 aa28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 DDR2Q16832 855 aa28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 MYLPFQ96A32 169 aa28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 E2F7Q96AV8 911 aa28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 ARHGEF3Q9NR81 526 aa28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 NME7Q9Y5B8 376 aa28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 MUC6Q6W4X9 2439 aa28.15■■■□□ 2.1
TSPAN4-217ENST00000527644 A8MXQ7 604 aa28.14■■■□□ 2.1
TSPAN4-217ENST00000527644 TRIM49P0CI25 452 aa28.14■■■□□ 2.1
TSPAN4-217ENST00000527644 TRIM49CP0CI26 452 aa28.14■■■□□ 2.1
TSPAN4-217ENST00000527644 NUBP1P53384 320 aa28.14■■■□□ 2.1
TSPAN4-217ENST00000527644 UBE2HP62256 183 aa28.14■■■□□ 2.1
TSPAN4-217ENST00000527644 STIM1Q13586 685 aa28.14■■■□□ 2.1
TSPAN4-217ENST00000527644 IER5LQ5T953 404 aa28.14■■■□□ 2.1
TSPAN4-217ENST00000527644 VSTM1Q6UX27 236 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms