RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CD72P21854 359 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 PCSK1P29120 753 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 RPL10AP62906 217 aaKnown RBP14.39□□□□□ -0.11
CAPN1-207ENST00000527189 DNM1Q05193 864 aaKnown RBP14.39□□□□□ -0.11
CAPN1-207ENST00000527189 BFSP1Q12934 665 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 SNRNP35Q16560 246 aaKnown RBP14.39□□□□□ -0.11
CAPN1-207ENST00000527189 BMT2Q1RMZ1 405 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 FOXD4L6Q3SYB3 417 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-207ENST00000527189 FOXD4L3Q6VB84 417 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-207ENST00000527189 LIMS2Q7Z4I7 341 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 CBWD2Q8IUF1 395 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 C12orf56Q8IXR9 622 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 XXYLT1Q8NBI6 393 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 SCFD1Q8WVM8 642 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 FUBP3Q96I24 572 aaKnown RBP eCLIP14.39□□□□□ -0.11
CAPN1-207ENST00000527189 GCNAQ96QF7 691 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 LPIN3Q9BQK8 851 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 IER2Q9BTL4 223 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 MKNK1Q9BUB5 465 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 ABI2Q9NYB9 513 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-207ENST00000527189 USP25Q9UHP3 1055 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 SPTBN2O15020 2390 aa14.39□□□□□ -0.11
CAPN1-207ENST00000527189 TSC2P49815 1807 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 SHISA7A6NL88 538 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 ARNTLO00327 626 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 DPYSL4O14531 572 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 LAMTOR5O43504 91 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 LRRN2O75325 713 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 MYL1P05976 194 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 SP9P0CG40 484 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 CSH1P0DML2 217 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 CSH2P0DML3 217 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 DDX6P26196 483 aaKnown RBP eCLIP14.38□□□□□ -0.11
CAPN1-207ENST00000527189 TARSP26639 723 aaKnown RBP14.38□□□□□ -0.11
CAPN1-207ENST00000527189 PSMD2Q13200 908 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 FZD5Q13467 585 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 PKP1Q13835 747 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 PSMD6Q15008 389 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
CAPN1-207ENST00000527189 SOWAHAQ2M3V2 549 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 CFAP221Q4G0U5 840 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 ARHGAP29Q52LW3 1261 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 INTS6LQ5JSJ4 861 aaKnown RBP14.38□□□□□ -0.11
CAPN1-207ENST00000527189 GPR158Q5T848 1215 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 GOLGA5Q8TBA6 731 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 CSGALNACT1Q8TDX6 532 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 HPDLQ96IR7 371 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 FNBP1Q96RU3 617 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 PKMYT1Q99640 499 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 C8orf33Q9H7E9 229 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-207ENST00000527189 IL21Q9HBE4 155 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 SPATA6Q9NWH7 488 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-207ENST00000527189 UXTQ9UBK9 157 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-207ENST00000527189 TCHHQ07283 1943 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 CHD8Q9HCK8 2581 aa14.38□□□□□ -0.11
CAPN1-207ENST00000527189 USP24Q9UPU5 2620 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 HMGA1P17096 107 aaKnown RBP14.37□□□□□ -0.11
CAPN1-207ENST00000527189 CMA1P23946 247 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 PLCB2Q00722 1185 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 CUL4BQ13620 913 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 MAPRE1Q15691 268 aaKnown RBP14.37□□□□□ -0.11
CAPN1-207ENST00000527189 STXBP5Q5T5C0 1151 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 FAM171BQ6P995 826 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 TRAPPC11Q7Z392 1133 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 ADGRF2Q8IZF7 708 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 MAML2Q8IZL2 1156 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-207ENST00000527189 ZNF687Q8N1G0 1237 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 OR5B17Q8NGF7 314 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 GIPC2Q8TF65 315 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 FAM3CQ92520 227 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 CEP295NLQ96MC4 621 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 PI4K2AQ9BTU6 479 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 BLZF1Q9H2G9 400 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 TMLHEQ9NVH6 421 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 ATP6V1DQ9Y5K8 247 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 PIAS3Q9Y6X2 628 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 MIA3Q5JRA6 1907 aa14.37□□□□□ -0.11
CAPN1-207ENST00000527189 F5P12259 2224 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 CACNA1IQ9P0X4 2223 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 CLIC2O15247 247 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 LMNAP02545 664 aaKnown RBP14.36□□□□□ -0.11
CAPN1-207ENST00000527189 F11P03951 625 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 TNNI1P19237 187 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 MAGEA11P43364 429 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 AFMP43652 599 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 NLRP12P59046 1061 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 KRT85P78386 507 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 CYP24A1Q07973 514 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 LMBRD2Q68DH5 695 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-207ENST00000527189 SCARA3Q6AZY7 606 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 C4orf50Q6ZRC1 276 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 NELFCDQ8IXH7 590 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 CMTM8Q8IZV2 173 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 CELF5Q8N6W0 485 aaKnown RBP14.36□□□□□ -0.11
CAPN1-207ENST00000527189 RDH13Q8NBN7 331 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 BPIFB1Q8TDL5 484 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 RSPRY1Q96DX4 576 aa14.36□□□□□ -0.11
CAPN1-207ENST00000527189 TRMT2BQ96GJ1 504 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms