RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ZNF280AP59817 542 aaPredicted RBP12.27□□□□□ -0.44
LINC01001-201ENST00000526704 MYL6P60660 151 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 FSTL1Q12841 308 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.44
LINC01001-201ENST00000526704 ZNF394Q53GI3 561 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 EFHC2Q5JST6 749 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 ERICH1Q86X53 443 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 WDR49Q8IV35 697 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 SCYL3Q8IZE3 742 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 TMEM35BQ8NCS4 154 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 ZNF280CQ8ND82 737 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 SLC7A3Q8WY07 619 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 TFAP2BQ92481 460 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 MAK16Q9BXY0 300 aaKnown RBP12.27□□□□□ -0.44
LINC01001-201ENST00000526704 ETNK1Q9HBU6 452 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 CISHQ9NSE2 258 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.44
LINC01001-201ENST00000526704 USH1CQ9Y6N9 552 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 IFNB1P01574 187 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 CDH5P33151 784 aaPredicted RBP12.27□□□□□ -0.45
LINC01001-201ENST00000526704 GDF10P55107 478 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 RASA2Q15283 850 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 ANKRD22Q5VYY1 191 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 C10orf82Q8WW14 230 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 WDR83Q9BRX9 315 aaKnown RBP12.27□□□□□ -0.45
LINC01001-201ENST00000526704 TEX13BQ9BXU2 312 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.45
LINC01001-201ENST00000526704 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 NIF3L1Q9GZT8 377 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 LRMDAQ9H2I8 198 aa12.27□□□□□ -0.45
LINC01001-201ENST00000526704 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.45
LINC01001-201ENST00000526704 ATP2A1O14983 1001 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 ADCY3O60266 1144 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 ITGBL1O95965 494 aaPredicted RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 GBP2P32456 591 aaPredicted RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 LACTBP83111 547 aaPredicted RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 SLC25A11Q02978 314 aaKnown RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 TAP1Q03518 808 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 HIF1AQ16665 826 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 MSS51Q4VC12 460 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 LRRC8CQ8TDW0 803 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 C12orf42Q96LP6 360 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 PCYT2Q99447 389 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 ZNF518BQ9C0D4 1074 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 C10orf88Q9H8K7 445 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 PPCSQ9HAB8 311 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 SAE1Q9UBE0 346 aaPredicted RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 PCDHGC3Q9UN70 934 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 IGKV6D-21A0A0A0MT36 114 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 WFS1O76024 890 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 PTPRAP18433 802 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 TARSP26639 723 aaKnown RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 ICAM3P32942 547 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 CTCFP49711 727 aaPredicted RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 AP3M2P53677 418 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 CLNS1AP54105 237 aaKnown RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 DYNLT1P63172 113 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 OTUD4Q01804 1114 aaKnown RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 GRM1Q13255 1194 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 SETDB1Q15047 1291 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 TARBP2Q15633 366 aaKnown RBP12.26□□□□□ -0.45
LINC01001-201ENST00000526704 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 FNBP1LQ5T0N5 605 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 SCARA5Q6ZMJ2 495 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 EP400NLQ6ZTU2 488 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 POLNQ7Z5Q5 900 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 ZBTB33Q86T24 672 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 CPT1BQ92523 772 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 TMEM237Q96Q45 408 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 AS3MTQ9HBK9 375 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 HACL1Q9UJ83 578 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 FZD1Q9UP38 647 aa12.26□□□□□ -0.45
LINC01001-201ENST00000526704 NDC80O14777 642 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 IL1R2P27930 398 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 RFC5P40937 340 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 GEMIN4P57678 1058 aaKnown RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 TFDP1Q14186 410 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 LVRNQ6Q4G3 990 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ZPBP2Q6X784 338 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ARFGAP1Q8N6T3 406 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ACTL9Q8TC94 416 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 RSRC1Q96IZ7 334 aaKnown RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 LRRC37BQ96QE4 947 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 RAB3IPQ96QF0 476 aaPredicted RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 SSU72Q9NP77 194 aaKnown RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 CYLDQ9NQC7 956 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 STK32BQ9NY57 414 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 TJP2Q9UDY2 1190 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 MSCO60682 206 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 DIAPH2O60879 1101 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 LRCH4O75427 683 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 WEE2P0C1S8 567 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 KRT4P19013 534 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 EIF4BP23588 611 aaKnown RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 SSTR1P30872 391 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ASPAP45381 313 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ATP11AP98196 1134 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 SATB1Q01826 763 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms