RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 VEPH1Q14D04 833 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 SDHAF4Q5VUM1 108 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 ZSCAN18Q8TBC5 510 aaPredicted RBP18.21■□□□□ 0.51
CCS-203ENST00000526058 SMARCD2Q92925 531 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 ELSPBP1Q96BH3 223 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 SYT15Q9BQS2 421 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 XYLT2Q9H1B5 865 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 KCNH6Q9H252 994 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 ATXN3LQ9H3M9 355 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 SLITRK6Q9H5Y7 841 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 FRMD4BQ9Y2L6 1034 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 DENND4CQ5VZ89 1909 aa18.21■□□□□ 0.51
CCS-203ENST00000526058 GADD45BO75293 160 aaPredicted RBP18.2■□□□□ 0.5
CCS-203ENST00000526058 AKAP3O75969 853 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 VNN1O95497 513 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 STAU1O95793 577 aaKnown RBP18.2■□□□□ 0.5
CCS-203ENST00000526058 NR2F2P24468 414 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 PLA2G5P39877 138 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 VIPR2P41587 438 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 CLCN5P51795 746 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 AP3M2P53677 418 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 NFIL3Q16649 462 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 DDR2Q16832 855 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 C1orf220Q5T0J3 134 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 FAM171BQ6P995 826 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 GPIHBP1Q8IV16 184 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 TMC2Q8TDI7 906 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 FAM122AQ96E09 287 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 IL21Q9HBE4 155 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 ZFP14Q9HCL3 533 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 CRTAC1Q9NQ79 661 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 ARHGEF3Q9NR81 526 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 NXF1Q9UBU9 619 aaKnown RBP18.2■□□□□ 0.5
CCS-203ENST00000526058 CDH9Q9ULB4 789 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 PCDHA5Q9Y5H7 936 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 DMDP11532 3685 aa18.2■□□□□ 0.5
CCS-203ENST00000526058 PTPRDP23468 1912 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 OBSL1O75147 1896 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 TACC1O75410 805 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 HMGA1P17096 107 aaKnown RBP18.19■□□□□ 0.5
CCS-203ENST00000526058 ATICP31939 592 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 GNL1P36915 607 aaPredicted RBP18.19■□□□□ 0.5
CCS-203ENST00000526058 TNNC1P63316 161 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 ADAM9Q13443 819 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 NCOA4Q13772 614 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 GRM2Q14416 872 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 TAF12Q16514 161 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 ZCWPW2Q504Y3 356 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 SPATA2LQ8IUW3 424 aaPredicted RBP18.19■□□□□ 0.5
CCS-203ENST00000526058 SYAP1Q96A49 352 aaPredicted RBP18.19■□□□□ 0.5
CCS-203ENST00000526058 TIGD1Q96MW7 591 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 MKNK1Q9BUB5 465 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 GPR88Q9GZN0 384 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 TBC1D17Q9HA65 648 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 ABCB6Q9NP58 842 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 RMND1Q9NWS8 449 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 CIZ1Q9ULV3 898 aaPredicted RBP18.19■□□□□ 0.5
CCS-203ENST00000526058 NCANO14594 1321 aa18.19■□□□□ 0.5
CCS-203ENST00000526058 MYO15AQ9UKN7 3530 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 STK25O00506 426 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 MAPK13O15264 365 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 AOC1P19801 751 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 PRCPP42785 496 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 VAMP7P51809 220 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 CYP4F8P98187 520 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 TCF15Q12870 199 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 ZNF699Q32M78 642 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 GPR158Q5T848 1215 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 ZNF658Q5TYW1 1059 aaPredicted RBP18.18■□□□□ 0.5
CCS-203ENST00000526058 VITQ6UXI7 678 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 SV2AQ7L0J3 742 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 OR6B3Q8NGW1 331 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 SPATA20Q8TB22 786 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 MYLPFQ96A32 169 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 RSPRY1Q96DX4 576 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 EEF2KMTQ96G04 330 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 GSDMAQ96QA5 445 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 SNX25Q9H3E2 840 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 VRTNQ9H8Y1 702 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 TRPV4Q9HBA0 871 aa18.18■□□□□ 0.5
CCS-203ENST00000526058 NUP210Q8TEM1 1887 aaPredicted RBP18.18■□□□□ 0.5
CCS-203ENST00000526058 GREB1Q4ZG55 1949 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 IKBKBO14920 756 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 CLSTN1O94985 981 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 SMC2O95347 1197 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 FGF19O95750 216 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 FAM163BP0C2L3 166 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 TRIM49P0CI25 452 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 TRIM49CP0CI26 452 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 RPL13P26373 211 aaKnown RBP18.17■□□□□ 0.5
CCS-203ENST00000526058 RAP1GAPP47736 663 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 CDH8P55286 799 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 ZACNQ401N2 412 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 SLC44A4Q53GD3 710 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 C4orf50Q6ZRC1 276 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 TMEM150AQ86TG1 271 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 ARID3BQ8IVW6 561 aaPredicted RBP18.17■□□□□ 0.5
CCS-203ENST00000526058 SCN4BQ8IWT1 228 aa18.17■□□□□ 0.5
CCS-203ENST00000526058 FAM186BQ8IYM0 893 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms