RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 AGFG1P52594 562 aaKnown RBP4.76□□□□□ -1.65
CD44-219ENST00000525685 SEC24CP53992 1094 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 PIGFQ07326 219 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 SCAPQ12770 1279 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 HABP2Q14520 560 aaPredicted RBP4.76□□□□□ -1.65
CD44-219ENST00000525685 PREPLQ4J6C6 727 aaPredicted RBP4.76□□□□□ -1.65
CD44-219ENST00000525685 AMOTQ4VCS5 1084 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 NOMO2Q5JPE7 1267 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 ABHD17BQ5VST6 288 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 B3GNTL1Q67FW5 361 aaPredicted RBP4.76□□□□□ -1.65
CD44-219ENST00000525685 AKNAQ7Z591 1439 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 FAM90A1Q86YD7 464 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 PDSS2Q86YH6 399 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 MAPKAPK5Q8IW41 473 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 TMEM132CQ8N3T6 1108 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 LRTOMTQ8WZ04 291 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 DDX17Q92841 729 aaKnown RBP4.76□□□□□ -1.65
CD44-219ENST00000525685 RNF31Q96EP0 1072 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 SMOQ99835 787 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 ZSWIM1Q9BR11 485 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 LRRC27Q9C0I9 530 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 ZMAT3Q9HA38 289 aaKnown RBP4.76□□□□□ -1.65
CD44-219ENST00000525685 RLIMQ9NVW2 624 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 OGDHLQ9ULD0 1010 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 L1RE1Q9UN81 338 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 PCDHGB6Q9Y5F9 930 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 ZMYM4Q5VZL5 1548 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 GPATCH8Q9UKJ3 1502 aaKnown RBP4.76□□□□□ -1.65
CD44-219ENST00000525685 AATKQ6ZMQ8 1374 aa4.76□□□□□ -1.65
CD44-219ENST00000525685 ADGRL1O94910 1474 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 POGZQ7Z3K3 1410 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 M0QYG6 137 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 POLRMTO00411 1230 aaKnown RBP4.75□□□□□ -1.65
CD44-219ENST00000525685 VPS4BO75351 444 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 CDKL5O76039 1030 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 PRSS23O95084 383 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 CHEK2O96017 543 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 HKR1P10072 659 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 BRAFP15056 766 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 TYRP1P17643 537 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 RHCEP18577 417 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 PEX2P28328 305 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 BLOC1S1P78537 153 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 HSD11B2P80365 405 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 SATB1Q01826 763 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 RHDQ02161 417 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 OCA2Q04671 838 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 FOXI1Q12951 378 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 KIF22Q14807 665 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 SAFBQ15424 915 aaKnown RBP eCLIP4.75□□□□□ -1.65
CD44-219ENST00000525685 SLC44A4Q53GD3 710 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 SLC30A10Q6XR72 485 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 ZNF783Q6ZMS7 281 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 CHST15Q7LFX5 561 aaPredicted RBP4.75□□□□□ -1.65
CD44-219ENST00000525685 USP37Q86T82 979 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 PRIMA1Q86XR5 153 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 KIAA0319LQ8IZA0 1049 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 MPP5Q8N3R9 675 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 PDPRQ8NCN5 879 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 TMIEQ8NEW7 156 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 OR6B3Q8NGW1 331 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 SCAMP4Q969E2 229 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 FUBP1Q96AE4 644 aaKnown RBP4.75□□□□□ -1.65
CD44-219ENST00000525685 KLHL32Q96NJ5 620 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 CNPPD1Q9BV87 410 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 ZNF287Q9HBT7 754 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 KIAA1586Q9HCI6 787 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 ZNHIT2Q9UHR6 403 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 SNX13Q9Y5W8 968 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 ARHGEF40Q8TER5 1519 aa4.75□□□□□ -1.65
CD44-219ENST00000525685 DENND4BO75064 1496 aaPredicted RBP4.75□□□□□ -1.65
CD44-219ENST00000525685 KDM5CP41229 1560 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 SYCP2Q9BX26 1530 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 ARHGEF12Q9NZN5 1544 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 CCDC78A2IDD5 438 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 A6NNZ2 444 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 ZAR1LA6NP61 321 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 TOR1BO14657 336 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 MATN4O95460 622 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 FOSP01100 380 aaPredicted RBP4.74□□□□□ -1.65
CD44-219ENST00000525685 FGFR4P22455 802 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 CLK3P49761 638 aaKnown RBP4.74□□□□□ -1.65
CD44-219ENST00000525685 PICALMQ13492 652 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 CCSAPQ6IQ19 270 aaPredicted RBP4.74□□□□□ -1.65
CD44-219ENST00000525685 LAYNQ6UX15 382 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 CELF5Q8N6W0 485 aaKnown RBP4.74□□□□□ -1.65
CD44-219ENST00000525685 NSUN7Q8NE18 718 aaKnown RBP4.74□□□□□ -1.65
CD44-219ENST00000525685 CAVIN3Q969G5 261 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 SUCLG2Q96I99 432 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 MED15Q96RN5 788 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 P2RX7Q99572 595 aaKnown RBP4.74□□□□□ -1.65
CD44-219ENST00000525685 SARGQ9BW04 601 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 APOL5Q9BWW9 433 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 TLR10Q9BXR5 811 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 ALOXE3Q9BYJ1 711 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 NUP62CLQ9H1M0 184 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 RIOX1Q9H6W3 641 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 SACM1LQ9NTJ5 587 aa4.74□□□□□ -1.65
CD44-219ENST00000525685 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms