RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 P4HA2O15460 535 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 CLASP2O75122 1294 aaKnown RBP6.93□□□□□ -1.3
CD44-214ENST00000525211 CILPO75339 1184 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 BEST1O76090 585 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 OAZ2O95190 189 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 GLP2RO95838 553 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 RB1P06400 928 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 UCHL3P15374 230 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 EPCAMP16422 314 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 TYMPP19971 482 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 ATICP31939 592 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 OR1D2P34982 312 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 ZNF75DP51815 510 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 RAD23BP54727 409 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 ARPP19P56211 112 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 POLR2FP61218 127 aaKnown RBP6.93□□□□□ -1.3
CD44-214ENST00000525211 HYAL1Q12794 435 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 CUL2Q13617 745 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 PSMD5Q16401 504 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 USP41Q3LFD5 358 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 CTXN3Q4LDR2 81 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 TCEAL5Q5H9L2 206 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 SDHAF4Q5VUM1 108 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 OVOS1Q6IE37 1185 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 LILRA6Q6PI73 481 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 SARM1Q6SZW1 724 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.93□□□□□ -1.3
CD44-214ENST00000525211 TMC7Q7Z402 723 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 ACOT1Q86TX2 421 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 DNAAF5Q86Y56 855 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 PALB2Q86YC2 1186 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 PPM1KQ8N3J5 372 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 TOP6BLQ8N6T0 577 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 MRPL43Q8N983 215 aaKnown RBP6.93□□□□□ -1.3
CD44-214ENST00000525211 SLC4A11Q8NBS3 891 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 ATAD1Q8NBU5 361 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 SLC22A17Q8WUG5 538 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 PIK3R5Q8WYR1 880 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 ZNF560Q96MR9 790 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 NT5C1BQ96P26 610 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 CDX2Q99626 313 aaPredicted RBP6.93□□□□□ -1.3
CD44-214ENST00000525211 C11orf84Q9BUA3 381 aaPredicted RBP6.93□□□□□ -1.3
CD44-214ENST00000525211 PLVAPQ9BX97 442 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 B3GNT5Q9BYG0 378 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 ZCWPW1Q9H0M4 648 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 RXFP1Q9HBX9 757 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 PRDM6Q9NQX0 595 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 TLR9Q9NR96 1032 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 AAASQ9NRG9 546 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 CISHQ9NSE2 258 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 MTMR10Q9NXD2 777 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 DDX43Q9NXZ2 648 aaKnown RBP6.93□□□□□ -1.3
CD44-214ENST00000525211 MTRRQ9UBK8 725 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 GTF3C4Q9UKN8 822 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 LZTS1Q9Y250 596 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 SLC27A5Q9Y2P5 690 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 MTCH2Q9Y6C9 303 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 PLXNA3P51805 1871 aa6.93□□□□□ -1.3
CD44-214ENST00000525211 SF3B1O75533 1304 aaKnown RBP eCLIP6.93□□□□□ -1.3
CD44-214ENST00000525211 PRUNE2Q8WUY3 3088 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 GTPBP10A4D1E9 387 aaKnown RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 TULP2O00295 520 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 SYN3O14994 580 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 CYP26A1O43174 497 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 STX10O60499 249 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 HUS1O60921 280 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 N4BP1O75113 896 aaKnown RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 TACC1O75410 805 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 CAVIN2O95810 425 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 GYPCP04921 128 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 CCDC130P13994 396 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 CHRNB2P17787 502 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 IGFBP4P22692 258 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 PPM1AP35813 382 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 PNPLA4P41247 253 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 NRIP1P48552 1158 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 GLUD2P49448 558 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 ZNF132P52740 706 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 JAM2P57087 298 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 TNNC1P63316 161 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 ROR1Q01973 937 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 KRT17Q04695 432 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 YWHAHQ04917 246 aaPredicted RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 DLX2Q07687 328 aaPredicted RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 INCA1Q0VD86 236 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 TBX2Q13207 712 aaPredicted RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 KCNC3Q14003 757 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 DRAP1Q14919 205 aaPredicted RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 MDH1BQ5I0G3 518 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 LLGL2Q6P1M3 1020 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 FAM171BQ6P995 826 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 VSTM4Q8IW00 320 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 DEFB123Q8N688 67 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 C12orf76Q8N812 135 aaPredicted RBP6.92□□□□□ -1.3
CD44-214ENST00000525211 APPL2Q8NEU8 664 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 ZMIZ2Q8NF64 920 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 OR6B3Q8NGW1 331 aa6.92□□□□□ -1.3
CD44-214ENST00000525211 GPR152Q8TDT2 470 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms