RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 LEMD2Q8NC56 503 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 SHDQ96IW2 340 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 TRMT61BQ9BVS5 477 aaKnown RBP13.48□□□□□ -0.25
SMCO4-202ENST00000525141 GTPBP4Q9BZE4 634 aaKnown RBP13.48□□□□□ -0.25
SMCO4-202ENST00000525141 MTMR12Q9C0I1 747 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 AGPAT3Q9NRZ7 376 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 CGNQ9P2M7 1197 aaKnown RBP13.48□□□□□ -0.25
SMCO4-202ENST00000525141 NME7Q9Y5B8 376 aa13.48□□□□□ -0.25
SMCO4-202ENST00000525141 HEPACAM2A8MVW5 462 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 ATP2C2O75185 946 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 KIF20AO95235 890 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 F11P03951 625 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 PSMC3P17980 439 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 ACAT1P24752 427 aaKnown RBP13.47□□□□□ -0.25
SMCO4-202ENST00000525141 LMO2P25791 158 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 TARSP26639 723 aaKnown RBP13.47□□□□□ -0.25
SMCO4-202ENST00000525141 PNPLA4P41247 253 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 PFKPQ01813 784 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 PLD1Q13393 1074 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 KNOP1Q1ED39 458 aaKnown RBP13.47□□□□□ -0.25
SMCO4-202ENST00000525141 ARID3BQ8IVW6 561 aaPredicted RBP13.47□□□□□ -0.25
SMCO4-202ENST00000525141 NELFCDQ8IXH7 590 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 LRRC52Q8N7C0 313 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 KIAA0895Q8NCT3 520 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 PLEKHO2Q8TD55 490 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 NOC3LQ8WTT2 800 aaKnown RBP13.47□□□□□ -0.25
SMCO4-202ENST00000525141 CLDN23Q96B33 292 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 ACBD6Q9BR61 282 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 SLC46A2Q9BY10 475 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 OSBPL6Q9BZF3 934 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 GPR88Q9GZN0 384 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 LTB4R2Q9NPC1 389 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 GTF3C4Q9UKN8 822 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 ITGA11Q9UKX5 1188 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 PCDHA5Q9Y5H7 936 aa13.47□□□□□ -0.25
SMCO4-202ENST00000525141 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 GOLGA6L22H0YM25 854 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 GFRA3O60609 400 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 KRT19P08727 400 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 SP9P0CG40 484 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 CYP2F1P24903 491 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 GABRR2P28476 465 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 GDI1P31150 447 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 BFSP1Q12934 665 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 DUOXA2Q1HG44 320 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 MGAT5BQ3V5L5 792 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 SDHAF4Q5VUM1 108 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 FAM171BQ6P995 826 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 HS2ST1Q7LGA3 356 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 TRAPPC11Q7Z392 1133 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 C1orf210Q8IVY1 113 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 DCP1BQ8IZD4 617 aaKnown RBP13.46□□□□□ -0.25
SMCO4-202ENST00000525141 STKLD1Q8NE28 680 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 SPPL2BQ8TCT7 592 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 C2orf15Q8WU43 125 aaKnown RBP13.46□□□□□ -0.25
SMCO4-202ENST00000525141 TMEM174Q8WUU8 243 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 KBTBD7Q8WVZ9 684 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 SMARCE1Q969G3 411 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 SEPT5Q99719 369 aaPredicted RBP13.46□□□□□ -0.25
SMCO4-202ENST00000525141 PI4K2AQ9BTU6 479 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 ATXN3LQ9H3M9 355 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 TRPV5Q9NQA5 729 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 DDX43Q9NXZ2 648 aaKnown RBP13.46□□□□□ -0.25
SMCO4-202ENST00000525141 SNX9Q9Y5X1 595 aa13.46□□□□□ -0.25
SMCO4-202ENST00000525141 DENND4CQ5VZ89 1909 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 PDXKO00764 312 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 HUS1O60921 280 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 WEE1P30291 646 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 CYP4F8P98187 520 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 CYP24A1Q07973 514 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 SMARCB1Q12824 385 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 UBXN2BQ14CS0 331 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 SNRNP35Q16560 246 aaKnown RBP13.45□□□□□ -0.26
SMCO4-202ENST00000525141 DDR2Q16832 855 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 WDR44Q5JSH3 913 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 INTS6LQ5JSJ4 861 aaKnown RBP13.45□□□□□ -0.26
SMCO4-202ENST00000525141 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 C12orf56Q8IXR9 622 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 GUF1Q8N442 669 aaKnown RBP13.45□□□□□ -0.26
SMCO4-202ENST00000525141 TOP6BLQ8N6T0 577 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 DNASE1L2Q92874 299 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 HPDLQ96IR7 371 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 ZNF560Q96MR9 790 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 BRD9Q9H8M2 597 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 KIAA1586Q9HCI6 787 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 DMAC2Q9NW81 257 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 ABI2Q9NYB9 513 aaPredicted RBP13.45□□□□□ -0.26
SMCO4-202ENST00000525141 PCDHB5Q9Y5E4 795 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 FAM186AA6NE01 2351 aa13.45□□□□□ -0.26
SMCO4-202ENST00000525141 COL4A2P08572 1712 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 PRR23AA6NEV1 266 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 TMEM191BP0C7N4 346 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 CYP2J2P51589 502 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 FCHO2Q0JRZ9 810 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 PSMD6Q15008 389 aa13.44□□□□□ -0.26
SMCO4-202ENST00000525141 SURF1Q15526 300 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms