RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 DAPP1Q9UN19 280 aa6□□□□□ -1.45
USP47-204ENST00000525078 PCDHGB5Q9Y5G0 923 aa6□□□□□ -1.45
USP47-204ENST00000525078 GPRASP1Q5JY77 1395 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 A0A1W2PR48 441 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 KCNQ3O43525 872 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 COQ9O75208 318 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 GJB3O75712 270 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 LY86O95711 162 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 GNAI2P04899 355 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 BTF3P20290 206 aaKnown RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 FUT4P22083 530 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 SREBF1P36956 1147 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 CLCN7P51798 805 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 CTXN1P60606 82 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 POU6F2P78424 691 aaPredicted RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 SEC23BQ15437 767 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 ZNF827Q17R98 1081 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 BTBD16Q32M84 506 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 TTC31Q49AM3 519 aaPredicted RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 PRRT3Q5FWE3 981 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 C1orf141Q5JVX7 400 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 FAXCQ5TGI0 409 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 SYT13Q7L8C5 426 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 SZRD1Q7Z422 152 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 PXKQ7Z7A4 578 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 PRPF39Q86UA1 669 aaKnown RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 LCA5Q86VQ0 697 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 SPACA3Q8IXA5 215 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 ADSSL1Q8N142 457 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 C17orf53Q8N3J3 647 aaPredicted RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 USP38Q8NB14 1042 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 APPL2Q8NEU8 664 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 OR8H1Q8NGG4 311 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 GOT1L1Q8NHS2 421 aaPredicted RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 ZNF480Q8WV37 535 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 STON2Q8WXE9 905 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 USP6NLQ92738 828 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 KCNN1Q92952 543 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 FAM120BQ96EK7 910 aaKnown RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 APOPT1Q96IL0 206 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 GPATCH1Q9BRR8 931 aaKnown RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 KRTAP9-2Q9BYQ4 174 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 FTOQ9C0B1 505 aaKnown RBP eCLIP5.99□□□□□ -1.45
USP47-204ENST00000525078 OR10A5Q9H207 317 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 BCO1Q9HAY6 547 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 SIDT1Q9NXL6 827 aaKnown RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 CHORDC1Q9UHD1 332 aaPredicted RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 DNAI1Q9UI46 699 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 RASAL2Q9UJF2 1139 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 C19orf53Q9UNZ5 99 aaPredicted RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 RUVBL1Q9Y265 456 aaKnown RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 DNAJC16Q9Y2G8 782 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 USP15Q9Y4E8 981 aaPredicted RBP5.99□□□□□ -1.45
USP47-204ENST00000525078 PSAT1Q9Y617 370 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 PIAS3Q9Y6X2 628 aa5.99□□□□□ -1.45
USP47-204ENST00000525078 A0A0A6YYK5 440 aaPredicted RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 STX16-NPEPL1H3BU86 382 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 STX16O14662 325 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 VILLO15195 856 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 KLK10O43240 276 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 HTATSF1O43719 755 aaKnown RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 USP2O75604 605 aaPredicted RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 ERAL1O75616 437 aaKnown RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 UNC5CO95185 931 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 ESR1P03372 595 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 GRPP07492 148 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 MSL3P1P0C860 447 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 SCG2P13521 617 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 TPH1P17752 444 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 TGM1P22735 817 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 ACVR2AP27037 513 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 ACSL1P33121 698 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 ADMP35318 185 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 PSMC2P35998 433 aaKnown RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 GGT5P36269 586 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 MSH2P43246 934 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 SLC11A2P49281 568 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 UCP3P55916 312 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 BPIFB3P59826 476 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 CYP27A1Q02318 531 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 MVKQ03426 396 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 NEXNQ0ZGT2 675 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 STK4Q13043 487 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 SLC5A9Q2M3M2 681 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 RINT1Q6NUQ1 792 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 Q6ZS46 218 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 LRRC8DQ7L1W4 858 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 RASGRP3Q8IV61 690 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 OR8H3Q8N146 312 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 FAM181AQ8N9Y4 354 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 NETO2Q8NC67 525 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 FBXO18Q8NFZ0 1043 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 OR7D4Q8NG98 312 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 SMCR8Q8TEV9 937 aaPredicted RBP5.98□□□□□ -1.45
USP47-204ENST00000525078 RAPGEF4Q8WZA2 1011 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 CPT1BQ92523 772 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 RSC1A1Q92681 617 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 JAKMIP2Q96AA8 810 aa5.98□□□□□ -1.45
USP47-204ENST00000525078 NOX5Q96PH1 765 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms