RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 RNF44Q7L0R7 432 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 DOK3Q7L591 496 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 CPXCR1Q8N123 301 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 TTYH3Q9C0H2 523 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 SERHLQ9NQF3 203 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 XPR1Q9UBH6 696 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 ZNF212Q9UDV6 495 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 MID2Q9UJV3 735 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 SLC39A10Q9ULF5 831 aa6.97□□□□□ -1.29
SKP1-213ENST00000524288 A0A087WWL8 130 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 hCG_1642624A0A1W2PR95 340 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 THAP12O43422 761 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 ADH4P08319 380 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 PDIA3P30101 505 aaKnown RBP6.96□□□□□ -1.3
SKP1-213ENST00000524288 POU6F2P78424 691 aaPredicted RBP6.96□□□□□ -1.3
SKP1-213ENST00000524288 BLMHQ13867 455 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 PGBD2Q6P3X8 592 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 GPRIN1Q7Z2K8 1008 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 ATG16L2Q8NAA4 619 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 ST8SIA2Q92186 375 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 SCAMP4Q969E2 229 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 ZC3H10Q96K80 434 aaKnown RBP6.96□□□□□ -1.3
SKP1-213ENST00000524288 A1CFQ9NQ94 594 aaKnown RBP6.96□□□□□ -1.3
SKP1-213ENST00000524288 LRFN1Q9P244 771 aa6.96□□□□□ -1.3
SKP1-213ENST00000524288 FAM234BA2RU67 622 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 MBD3L4A6NDZ8 208 aaPredicted RBP6.95□□□□□ -1.3
SKP1-213ENST00000524288 MBD3L3A6NE82 208 aaPredicted RBP6.95□□□□□ -1.3
SKP1-213ENST00000524288 DRGXA6NNA5 263 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 FFAR2O15552 330 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 PLA2G6O60733 806 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 THP07101 528 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 FCER1AP12319 257 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 KLRC1P26715 233 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 MAN2A2P49641 1150 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 RENBPP51606 427 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 SLFN5Q08AF3 891 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 CNGB1Q14028 1251 aaPredicted RBP6.95□□□□□ -1.3
SKP1-213ENST00000524288 FBXO38Q6PIJ6 1188 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 SLC30A10Q6XR72 485 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 LDHAL6AQ6ZMR3 332 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 BEND5Q7L4P6 421 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 ZNF354CQ86Y25 554 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 SYT12Q8IV01 421 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 GSPT2Q8IYD1 628 aaKnown RBP6.95□□□□□ -1.3
SKP1-213ENST00000524288 FANCBQ8NB91 859 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 IPO4Q8TEX9 1081 aaKnown RBP6.95□□□□□ -1.3
SKP1-213ENST00000524288 HEPHQ9BQS7 1158 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 STK33Q9BYT3 514 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 OBP2BQ9NPH6 170 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 HECAQ9UBI9 543 aaPredicted RBP6.95□□□□□ -1.3
SKP1-213ENST00000524288 GRHPRQ9UBQ7 328 aa6.95□□□□□ -1.3
SKP1-213ENST00000524288 AQP12BA6NM10 295 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 RAB27BO00194 218 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 PODXLO00592 558 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 IPO13O94829 963 aaKnown RBP6.94□□□□□ -1.3
SKP1-213ENST00000524288 FGAP02671 866 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 CSTBP04080 98 aaKnown RBP6.94□□□□□ -1.3
SKP1-213ENST00000524288 ANXA1P04083 346 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 TXNP10599 105 aaKnown RBP6.94□□□□□ -1.3
SKP1-213ENST00000524288 GRK6P43250 576 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 ITGA8P53708 1063 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 INHBCP55103 352 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 GALNT1Q10472 559 aaPredicted RBP6.94□□□□□ -1.3
SKP1-213ENST00000524288 BIRC3Q13489 604 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 BOP1Q14137 746 aaKnown RBP6.94□□□□□ -1.3
SKP1-213ENST00000524288 FNDC7Q5VTL7 733 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 HTR3DQ70Z44 454 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 OR52N2Q8NGI0 321 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 SPSB4Q96A44 273 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 MARS2Q96GW9 593 aaKnown RBP6.94□□□□□ -1.3
SKP1-213ENST00000524288 MYLK2Q9H1R3 596 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 AATKQ6ZMQ8 1374 aa6.94□□□□□ -1.3
SKP1-213ENST00000524288 LGALS16A8MUM7 142 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 H7C4K7 107 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 SH3BP5O60239 455 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 MFAP3LO75121 409 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 PPFIA4O75335 1185 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 SKAP2O75563 359 aaPredicted RBP6.93□□□□□ -1.3
SKP1-213ENST00000524288 PFKFB4Q16877 469 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 FAM160B1Q5W0V3 765 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 TLDC1Q6P9B6 456 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 SMAP1Q8IYB5 467 aaPredicted RBP6.93□□□□□ -1.3
SKP1-213ENST00000524288 SPATA5Q8NB90 893 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 ATXN2LQ8WWM7 1075 aaKnown RBP6.93□□□□□ -1.3
SKP1-213ENST00000524288 DDX17Q92841 729 aaKnown RBP6.93□□□□□ -1.3
SKP1-213ENST00000524288 CHFRQ96EP1 664 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 SLC46A1Q96NT5 459 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 NEU1Q99519 415 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 CNPPD1Q9BV87 410 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 SPATA5L1Q9BVQ7 753 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 MMRN2Q9H8L6 949 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 VSX1Q9NZR4 365 aaPredicted RBP6.93□□□□□ -1.3
SKP1-213ENST00000524288 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.93□□□□□ -1.3
SKP1-213ENST00000524288 DGKBQ9Y6T7 804 aa6.93□□□□□ -1.3
SKP1-213ENST00000524288 A0A087WZ62 844 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 CCDC78A2IDD5 438 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 LEFTY2O00292 366 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 POLRMTO00411 1230 aaKnown RBP6.92□□□□□ -1.3
SKP1-213ENST00000524288 TRIM38O00635 465 aa6.92□□□□□ -1.3
SKP1-213ENST00000524288 IL1R2P27930 398 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms