RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 TNNC1P63316 161 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
CLN8-207ENST00000524258 INCA1Q0VD86 236 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 NFE2Q16621 373 aaPredicted RBP12.78□□□□□ -0.36
CLN8-207ENST00000524258 CFAP221Q4G0U5 840 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 PAQR9Q6ZVX9 377 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 FBXL13Q8NEE6 735 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 MYCBPAPQ8TBZ2 947 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 TATDN2Q93075 761 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 TCEAL4Q96EI5 215 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 FAXDC2Q96IV6 333 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 ABCB6Q9NP58 842 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLN8-207ENST00000524258 RAB20Q9NX57 234 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 EPS15L1Q9UBC2 864 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 HMGXB4Q9UGU5 601 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
CLN8-207ENST00000524258 PCDHB5Q9Y5E4 795 aa12.78□□□□□ -0.36
CLN8-207ENST00000524258 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 STX10O60499 249 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 LRG1P02750 347 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 PTPN2P17706 415 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 PTPN1P18031 435 aaKnown RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 FSHRP23945 695 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 CYP2F1P24903 491 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 MAGEA11P43364 429 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 TUFMP49411 452 aaKnown RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 GPR15P49685 360 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 TSPY1Q01534 308 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 PABPC1LQ4VXU2 614 aaKnown RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 DCAF17Q5H9S7 520 aaPredicted RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 CT47A1Q5JQC4 288 aaPredicted RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 SCARA5Q6ZMJ2 495 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 OTOP3Q7RTS5 596 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 DNAJB7Q7Z6W7 309 aaPredicted RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 CRYBG2Q8N1P7 616 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 UBR7Q8N806 425 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 PSMG2Q969U7 264 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLN8-207ENST00000524258 TWNKQ96RR1 684 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 PIDD1Q9HB75 910 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 IL21Q9HBE4 155 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 ZNF334Q9HCZ1 680 aaPredicted RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 ABI2Q9NYB9 513 aaPredicted RBP12.77□□□□□ -0.37
CLN8-207ENST00000524258 NR2E1Q9Y466 385 aa12.77□□□□□ -0.37
CLN8-207ENST00000524258 MYO10Q9HD67 2058 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 ANHXE9PGG2 379 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 MICAL2O94851 1124 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 GNA14O95837 355 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 LAMP2P13473 410 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 SSTR3P32745 418 aaPredicted RBP12.76□□□□□ -0.37
CLN8-207ENST00000524258 CACNA2D1P54289 1103 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 TCERG1LQ5VWI1 586 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 GAREM2Q75VX8 874 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 TMEM150AQ86TG1 271 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 NPAS3Q8IXF0 933 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 OR6B3Q8NGW1 331 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 FGF13Q92913 245 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 MYLPFQ96A32 169 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 PCED1BQ96HM7 432 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 ARID3AQ99856 593 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 CORO1BQ9BR76 489 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 B3GNT5Q9BYG0 378 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 EPHX3Q9H6B9 360 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 CYP3A43Q9HB55 503 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLN8-207ENST00000524258 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 CDH7Q9ULB5 785 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 ASB3Q9Y575 518 aa12.76□□□□□ -0.37
CLN8-207ENST00000524258 A8MXQ7 604 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 P4HA2O15460 535 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 CILPO75339 1184 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 CEBPBP17676 345 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 NDST1P52848 882 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 DDR2Q16832 855 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 MGAT5BQ3V5L5 792 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 CCDC40Q4G0X9 1142 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 MDH1BQ5I0G3 518 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 SDHAF4Q5VUM1 108 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 DPY19L2P1Q6NXN4 242 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 C11orf57Q6ZUT1 292 aaPredicted RBP12.75□□□□□ -0.37
CLN8-207ENST00000524258 UNC93AQ86WB7 457 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 TDRD5Q8NAT2 981 aaKnown RBP12.75□□□□□ -0.37
CLN8-207ENST00000524258 B3GALNT2Q8NCR0 500 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 SHKBP1Q8TBC3 707 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 GPR152Q8TDT2 470 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 CNOT6LQ96LI5 555 aaKnown RBP12.75□□□□□ -0.37
CLN8-207ENST00000524258 ZNF512Q96ME7 567 aaPredicted RBP12.75□□□□□ -0.37
CLN8-207ENST00000524258 SEPT5Q99719 369 aaPredicted RBP12.75□□□□□ -0.37
CLN8-207ENST00000524258 ELOVL4Q9GZR5 314 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 THAP9Q9H5L6 903 aa12.75□□□□□ -0.37
CLN8-207ENST00000524258 C11orf16Q9NQ32 467 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms