RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CBWD5Q5RIA9 395 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 SASS6Q6UVJ0 657 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 UNC93AQ86WB7 457 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 SPATA2LQ8IUW3 424 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 FAM114A1Q8IWE2 563 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 TRIM59Q8IWR1 403 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 TNIP3Q96KP6 325 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 CEP295NLQ96MC4 621 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 BCO2Q9BYV7 579 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 CRISPLD1Q9H336 500 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 SMYD3Q9H7B4 428 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 ABI2Q9NYB9 513 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 DNMT3BQ9UBC3 853 aaKnown RBP13.41□□□□□ -0.26
VEGFA-225ENST00000523950 GTF3C4Q9UKN8 822 aa13.41□□□□□ -0.26
VEGFA-225ENST00000523950 MYBPHLA2RUH7 354 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 C2CD4DB7Z1M9 353 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 DLL1O00548 723 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 FGF19O95750 216 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 RHOP08100 348 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 LMO2P25791 158 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 MAGEA11P43364 429 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 ASPAP45381 313 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 RPL10AP62906 217 aaKnown RBP13.4□□□□□ -0.26
VEGFA-225ENST00000523950 INCA1Q0VD86 236 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 CYP4A22Q5TCH4 519 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 VSTM1Q6UX27 236 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 PDZD4Q76G19 769 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-225ENST00000523950 FEZF2Q8TBJ5 459 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 MYCBPAPQ8TBZ2 947 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 PSMG2Q969U7 264 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 SEPT5Q99719 369 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-225ENST00000523950 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 ASAH2Q9NR71 780 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 TMLHEQ9NVH6 421 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 ANO10Q9NW15 660 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 EPS15L1Q9UBC2 864 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 MAGEC2Q9UBF1 373 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-225ENST00000523950 SLC27A5Q9Y2P5 690 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.4□□□□□ -0.261e-11■□□□□ 9.4
VEGFA-225ENST00000523950 NOTCH4Q99466 2003 aa13.4□□□□□ -0.26
VEGFA-225ENST00000523950 AFPP02771 609 aaKnown RBP13.39□□□□□ -0.27
VEGFA-225ENST00000523950 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
VEGFA-225ENST00000523950 PSMC1P62191 440 aaKnown RBP13.39□□□□□ -0.27
VEGFA-225ENST00000523950 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 STX1AQ16623 288 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 SPOPLQ6IQ16 392 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 SCARA5Q6ZMJ2 495 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 GET4Q7L5D6 327 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-225ENST00000523950 TTC9BQ8N6N2 239 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 B3GALNT2Q8NCR0 500 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 SEMA4DQ92854 862 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 NXPE3Q969Y0 559 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 MYLPFQ96A32 169 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 CNOT6LQ96LI5 555 aaKnown RBP13.39□□□□□ -0.27
VEGFA-225ENST00000523950 MED15Q96RN5 788 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 CORO1BQ9BR76 489 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 SDCBP2Q9H190 292 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 DNAJC25Q9H1X3 360 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 APOBEC3GQ9HC16 384 aaKnown RBP13.39□□□□□ -0.27
VEGFA-225ENST00000523950 CD320Q9NPF0 282 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 CRTAC1Q9NQ79 661 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 CEP72Q9P209 647 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 CDH7Q9ULB5 785 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 MRPS23Q9Y3D9 190 aaKnown RBP13.39□□□□□ -0.27
VEGFA-225ENST00000523950 NME7Q9Y5B8 376 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 DOCK8Q8NF50 2099 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 ATP8B3O60423 1300 aa13.39□□□□□ -0.27
VEGFA-225ENST00000523950 ATP2C2O75185 946 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 PDGFRBP09619 1106 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 CSH1P0DML2 217 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 CSH2P0DML3 217 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 ALADP13716 330 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 ATF6P18850 670 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 TBXAS1P24557 533 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-225ENST00000523950 GBP2P32456 591 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-225ENST00000523950 RAP1GAPP47736 663 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 CDH8P55286 799 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 YWHAEP62258 255 aaKnown RBP13.38□□□□□ -0.27
VEGFA-225ENST00000523950 NTHL1P78549 312 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 KLHL40Q2TBA0 621 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 PRSS36Q5K4E3 855 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 DNAJB7Q7Z6W7 309 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-225ENST00000523950 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 CRYBG2Q8N1P7 616 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 ENOX1Q8TC92 643 aaKnown RBP13.38□□□□□ -0.27
VEGFA-225ENST00000523950 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 PCED1BQ96HM7 432 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 GDE1Q9NZC3 331 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 IGSF9Q9P2J2 1179 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 DOCK6Q96HP0 2047 aa13.38□□□□□ -0.27
VEGFA-225ENST00000523950 TRIM66O15016 1216 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 HCRTO43612 131 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 LETM1O95202 739 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-225ENST00000523950 LAMP2P13473 410 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 CYP2F1P24903 491 aa13.37□□□□□ -0.27
VEGFA-225ENST00000523950 NDST1P52848 882 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms