RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655		A0A1B0GTW7	788 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	TCRBV7S2A1N4T	A0A589	114 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	CDKL5	O76039	1030 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	POMC	P01189	267 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	MTHFD2	P13995	350 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	CD53	P19397	219 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	CHST15	Q7LFX5	561 aa	Predicted RBP	5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	FAM43A	Q8N2R8	423 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	NRG4	Q8WWG1	115 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	NACC2	Q96BF6	587 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	MARS2	Q96GW9	593 aa	Known RBP	5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	LRGUK	Q96M69	825 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	SENP7	Q9BQF6	1050 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	NMRK2	Q9NPI5	230 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	LANCL2	Q9NS86	450 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	SAP30BP	Q9UHR5	308 aa	Known RBP	5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	PHTF1	Q9UMS5	762 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	MST1R	Q04912	1400 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	FMN1	Q68DA7	1419 aa		5.7	□□□□□ -1.5
SREK1-213	ENST00000523655	SYCP2	Q9BX26	1530 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	ZAR1L	A6NP61	321 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	PMM2	O15305	246 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	ZFPL1	O95159	310 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	IL33	O95760	270 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	HSPA1A	P0DMV8	641 aa	Known RBP	5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	HSPA1B	P0DMV9	641 aa	Known RBP	5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	IL2RB	P14784	551 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	TYRP1	P17643	537 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	IRX6	P78412	446 aa	Predicted RBP	5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	KRT72	Q14CN4	511 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	SLC35G2	Q8TBE7	412 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655		Q96MF0	132 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	BBC3	Q96PG8	261 aa	Predicted RBP	5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	SLC12A5	Q9H2X9	1139 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	R3HDML	Q9H3Y0	253 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	PLCB1	Q9NQ66	1216 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	ANAPC4	Q9UJX5	808 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	FAM50B	Q9Y247	325 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	GPR45	Q9Y5Y3	372 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	MYOM1	P52179	1685 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	SLIT2	O94813	1529 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	DLC1	Q96QB1	1528 aa		5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	GPATCH8	Q9UKJ3	1502 aa	Known RBP	5.69	□□□□□ -1.5
SREK1-213	ENST00000523655	COL11A2	P13942	1736 aa	Predicted RBP	5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	CFAP65	Q6ZU64	1925 aa	Known RBP	5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	INO80	Q9ULG1	1556 aa	Predicted RBP	5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	PREX2	Q70Z35	1606 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	KLHL33	A6NCF5	533 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	HLA-DOA	P06340	250 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	HKR1	P10072	659 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	AKAP5	P24588	427 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	MPL	P40238	635 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	NOMO3	P69849	1222 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	NOMO2	Q5JPE7	1267 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	TAAR9	Q96RI9	348 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	GSTO2	Q9H4Y5	243 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	MOCS1	Q9NZB8	636 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	HSFX1	Q9UBD0	423 aa		5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	TES	Q9UGI8	421 aa	Known RBP	5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	CHD2	O14647	1828 aa	Known RBP	5.68	□□□□□ -1.5
SREK1-213	ENST00000523655	MYOM2	P54296	1465 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	PRX	Q9BXM0	1461 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	MGST3	O14880	152 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	KIAA0391	O15091	583 aa	Known RBP	5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	NPHP1	O15259	732 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	XPOT	O43592	962 aa	Known RBP	5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	GPR32	O75388	356 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	RHCE	P18577	417 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	AGXT	P21549	392 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	GCSH	P23434	173 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	IL12RB1	P42701	662 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	TRAPPC10	P48553	1259 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	CXADR	P78310	365 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	RHD	Q02161	417 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	TAP1	Q03518	808 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	MGAT2	Q10469	447 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	MTM1	Q13496	603 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	IDI1	Q13907	227 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	CLUL1	Q15846	466 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	ANO4	Q32M45	955 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	OTUD7B	Q6GQQ9	843 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	ADGRG3	Q86Y34	549 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	DRC7	Q8IY82	874 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	DCBLD1	Q8N8Z6	715 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	TEKT5	Q96M29	485 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	HERPUD2	Q9BSE4	406 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	ALG13	Q9NP73	1137 aa	Known RBP	5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	NLRC4	Q9NPP4	1024 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	TMEM140	Q9NV12	185 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	VSX1	Q9NZR4	365 aa	Predicted RBP	5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	PCDHA13	Q9Y5I0	950 aa		5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	MYBBP1A	Q9BQG0	1328 aa	Known RBP	5.67	□□□□□ -1.5
SREK1-213	ENST00000523655	KIAA1107	Q9UPP5	1409 aa		5.66	□□□□□ -1.5
SREK1-213	ENST00000523655	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	5.66	□□□□□ -1.5
SREK1-213	ENST00000523655	CDHR4	A6H8M9	788 aa		5.66	□□□□□ -1.5
SREK1-213	ENST00000523655	AP1G1	O43747	822 aa		5.66	□□□□□ -1.5
SREK1-213	ENST00000523655	CTNND1	O60716	968 aa	Known RBP	5.66	□□□□□ -1.5
SREK1-213	ENST00000523655	ENDOD1	O94919	500 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 71 ms