RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ICE1Q9Y2F5 2266 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 FRMPD2Q68DX3 1309 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 RSPH10B2B2RC85 870 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 hCG_1984214I3L0E3 225 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 PIP5K1CO60331 668 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 ARIH2O95376 493 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 PRAMEF1O95521 474 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 APPP05067 770 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 GSNP06396 782 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 ZNF806P0C7X5 589 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 RSPH10BP0C881 870 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 PPM1FP49593 454 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 NEK3P51956 506 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 PRKCQQ04759 706 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 WASHC5Q12768 1159 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 MTA1Q13330 715 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 WDR43Q15061 677 aaKnown RBP eCLIP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 ATP2B3Q16720 1220 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 CLEC16AQ2KHT3 1053 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 SV2CQ496J9 727 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 ZC3H12BQ5HYM0 836 aaKnown RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 TCEAL6Q6IPX3 200 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 CES5AQ6NT32 575 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 XRRA1Q6P2D8 792 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 DCLRE1AQ6PJP8 1040 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 C16orf54Q6UWD8 224 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 TMPRSS7Q7RTY8 843 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 STK11IPQ8N1F8 1099 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 BVESQ8NE79 360 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 FRS2Q8WU20 508 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 CHAC2Q8WUX2 184 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 SEPT8Q92599 483 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 TCEAL3Q969E4 200 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 CCDC47Q96A33 483 aaKnown RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 CLDN23Q96B33 292 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 TRMT2BQ96GJ1 504 aaKnown RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 MPP4Q96JB8 637 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 HSPA12BQ96MM6 686 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 NUP88Q99567 741 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 DSCC1Q9BVC3 393 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 ASPSCR1Q9BZE9 553 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 FZD8Q9H461 694 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 RAVER2Q9HCJ3 691 aaKnown RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 VTA1Q9NP79 307 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 RIC8AQ9NPQ8 531 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 SEMA3GQ9NS98 782 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 GFOD1Q9NXC2 390 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 C9orf78Q9NZ63 289 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 HMG20BQ9P0W2 317 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 APEX2Q9UBZ4 518 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 SERPINB13Q9UIV8 391 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 MCM8Q9UJA3 840 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 DBR1Q9UK59 544 aaKnown RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 VAV3Q9UKW4 847 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 NOB1Q9ULX3 412 aaKnown RBP5.79□□□□□ -1.48
PABPC1-223ENST00000523636 EMC9Q9Y3B6 208 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 NUP205Q92621 2012 aa5.79□□□□□ -1.48
PABPC1-223ENST00000523636 GOLGA4Q13439 2230 aaKnown RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 KANSL1LA0AUZ9 987 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 SHISA3A0PJX4 238 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 ASB14A6NK59 587 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 F5H6K3 240 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 EYA2O00167 538 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 HAS3O00219 553 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 NOP56O00567 594 aaKnown RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 PRPF3O43395 683 aaKnown RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 HMMRO75330 724 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 HLA-DOAP06340 250 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 CD72P21854 359 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 FLT3P36888 993 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 ANP32AP39687 249 aaKnown RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 HALP42357 657 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 NEK2P51955 445 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 SSRP1Q08945 709 aaKnown RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 MTAPQ13126 283 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 MLC1Q15049 377 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 TAF11Q15544 211 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 GAB4Q2WGN9 574 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 PAN2Q504Q3 1202 aaKnown RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 CDKAL1Q5VV42 579 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 SPATC1Q76KD6 591 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 RASSF3Q86WH2 238 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 DGKHQ86XP1 1220 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 CMTR2Q8IYT2 770 aaKnown RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 MDM1Q8TC05 714 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 THAP3Q8WTV1 239 aaPredicted RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 ASB11Q8WXH4 323 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 PGBD4Q96DM1 585 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 HRASLS5Q96KN8 279 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 MRGPRX3Q96LB0 322 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 SPATA9Q9BWV2 254 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 CDH19Q9H159 772 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 ARRDC1-AS1Q9H2J1 176 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 CABP5Q9NP86 173 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 IGSF9Q9P2J2 1179 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 CGGBP1Q9UFW8 167 aaPredicted RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 RAB23Q9ULC3 237 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 AKT3Q9Y243 479 aa5.78□□□□□ -1.48
PABPC1-223ENST00000523636 MUC22E2RYF6 1773 aaPredicted RBP5.78□□□□□ -1.48
PABPC1-223ENST00000523636 NBASA2RRP1 2371 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms