RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 THEM5Q8N1Q8 247 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 TOP6BLQ8N6T0 577 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 ZNF653Q96CK0 615 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 RHOBTB2Q9BYZ6 727 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 UBE2OQ9C0C9 1292 aaKnown RBP9.92□□□□□ -0.82
SDCBP-212ENST00000523483 SF3B1O75533 1304 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■■■■■ 66.8
SDCBP-212ENST00000523483 MED7O43513 233 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 GALCP54803 685 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 GNG11P61952 73 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 CDK17Q00537 523 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 MAPK8IP2Q13387 824 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-212ENST00000523483 TAS1R1Q7RTX1 841 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 RIN2Q8WYP3 895 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-212ENST00000523483 THAP2Q9H0W7 228 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 ABI2Q9NYB9 513 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-212ENST00000523483 CTTNBP2NLQ9P2B4 639 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 DAAM1Q9Y4D1 1078 aa9.92□□□□□ -0.82
SDCBP-212ENST00000523483 TDRD15B5MCY1 1934 aaKnown RBP9.92□□□□□ -0.82
SDCBP-212ENST00000523483 KRT86O43790 486 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 MICAL2O94851 1124 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 TSPY1Q01534 308 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 PTPN14Q15678 1187 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 VARS2Q5ST30 1063 aaKnown RBP9.91□□□□□ -0.82
SDCBP-212ENST00000523483 SPRED2Q7Z698 418 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 HERC6Q8IVU3 1022 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 SCN4BQ8IWT1 228 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 MICAL1Q8TDZ2 1067 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 BCL7CQ8WUZ0 217 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-212ENST00000523483 DNAI2Q9GZS0 605 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 GOLPH3Q9H4A6 298 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 ADAM22Q9P0K1 906 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 TANC1Q9C0D5 1861 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 TULP2O00295 520 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 GJB6O95452 261 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 STAU1O95793 577 aaKnown RBP9.91□□□□□ -0.82
SDCBP-212ENST00000523483 PTPN1P18031 435 aaKnown RBP9.91□□□□□ -0.82
SDCBP-212ENST00000523483 PCSK1P29120 753 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 LHX1P48742 406 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 VAV2P52735 878 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 INCA1Q0VD86 236 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 SHHQ15465 462 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 SLC39A12Q504Y0 691 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 TMEM35BQ8NCS4 154 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 DDX1Q92499 740 aaKnown RBP9.91□□□□□ -0.82
SDCBP-212ENST00000523483 SUSD3Q96L08 255 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 MIS12Q9H081 205 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 MARCH5Q9NX47 278 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 KIF5CO60282 957 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 VDRP11473 427 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 CTNNB1P35222 781 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 ZNF132P52740 706 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 ASTE1Q2TB18 679 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-212ENST00000523483 ZNF569Q5MCW4 686 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 RTP2Q5QGT7 225 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 ERICH1Q86X53 443 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 STKLD1Q8NE28 680 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 OR10T2Q8NGX3 314 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 ALG13Q9NP73 1137 aaKnown RBP9.91□□□□□ -0.82
SDCBP-212ENST00000523483 KRT82Q9NSB4 513 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 TJP2Q9UDY2 1190 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 INSL6Q9Y581 213 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 PCDHB12Q9Y5F1 795 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 MICAL3Q7RTP6 2002 aa9.91□□□□□ -0.82
SDCBP-212ENST00000523483 O00370 1275 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 TACC1O75410 805 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 MOCS3O95396 460 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 FECHP22830 423 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 BDNFP23560 247 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 MAP3K7CLP57077 242 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 SLC8A3P57103 927 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 CD300LGQ6UXG3 332 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 CRIPAKQ8N1N5 446 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 TMEM86AQ8N2M4 240 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 TTC39CQ8N584 583 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 PCED1BQ96HM7 432 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 PSMB7Q99436 277 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 HYOU1Q9Y4L1 999 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 CCP110O43303 1012 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 GRAP2O75791 330 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 PAEPP09466 180 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 LCP1P13796 627 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 SSR1P43307 286 aaKnown RBP9.9□□□□□ -0.82
SDCBP-212ENST00000523483 KIAA0319Q5VV43 1072 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 UNC93AQ86WB7 457 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 UBR7Q8N806 425 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 SECISBP2LQ93073 1101 aaKnown RBP9.9□□□□□ -0.82
SDCBP-212ENST00000523483 IGSF21Q96ID5 467 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 NOX5Q96PH1 765 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 OSGEPQ9NPF4 335 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 CRTAC1Q9NQ79 661 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 CNOT8Q9UFF9 292 aaKnown RBP9.9□□□□□ -0.82
SDCBP-212ENST00000523483 DNAI1Q9UI46 699 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 CDY1Q9Y6F8 540 aa9.9□□□□□ -0.82
SDCBP-212ENST00000523483 ARHGEF37A1IGU5 675 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 RRM1P23921 792 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 PDE4CQ08493 712 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 CLEC16AQ2KHT3 1053 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 SDHAF4Q5VUM1 108 aa9.9□□□□□ -0.83
SDCBP-212ENST00000523483 SYT10Q6XYQ8 523 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms