RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 RPL10AP62906 217 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 MYL7Q01449 175 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 LRRC32Q14392 662 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 E2F4Q16254 413 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 ERMP1Q7Z2K6 904 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 TMEM150AQ86TG1 271 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 CMTM8Q8IZV2 173 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 TOP6BLQ8N6T0 577 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 TTC8Q8TAM2 541 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 SPATA18Q8TC71 538 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 BPIFB1Q8TDL5 484 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 HPS3Q969F9 1004 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 FAM84AQ96KN4 292 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 MTMR12Q9C0I1 747 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 INTS13Q9NVM9 706 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 GTSE1Q9NYZ3 720 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 NCDNQ9UBB6 729 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 R3HCC1Q9Y3T6 440 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 SNX9Q9Y5X1 595 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 FANCMQ8IYD8 2048 aa12.64□□□□□ -0.39
CTNNA1-237ENST00000523275 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 CUTAO60888 179 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 CSH1P0DML2 217 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 CSH2P0DML3 217 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 TDGF1P13385 188 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 ACAT1P24752 427 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 CYP2F1P24903 491 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 DDX6P26196 483 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 CTHP32929 405 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 AVPR1AP37288 418 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 LHX1P48742 406 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 TNK2Q07912 1038 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 MYO1EQ12965 1108 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 SURF1Q15526 300 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 DDR2Q16832 855 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 DUOXA2Q1HG44 320 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 ITPRIPL2Q3MIP1 535 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 INTS6LQ5JSJ4 861 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 DGKKQ5KSL6 1271 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 MON1AQ86VX9 555 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 MAB21L3Q8N8X9 362 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 IQUBQ8NA54 791 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 GLIS3Q8NEA6 775 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 LEO1Q8WVC0 666 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 SECISBP2LQ93073 1101 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 DHX58Q96C10 678 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 ANKRD36BP1Q96IX9 119 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 TRIM9Q9C026 710 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 SMG9Q9H0W8 520 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 KIAA1586Q9HCI6 787 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 GKN1Q9NS71 199 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 SIX4Q9UIU6 781 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 GTF3C4Q9UKN8 822 aa12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 MAGED2Q9UNF1 606 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 SMG5Q9UPR3 1016 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-237ENST00000523275 PATJQ8NI35 1801 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 GABRDO14764 452 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 YEATS4O95619 227 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 TNNC2P02585 160 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 PDIA4P13667 645 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 PCSK1P29120 753 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 HOXD13P35453 343 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 GPR15P49685 360 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 ASIC1P78348 528 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 SATB1Q01826 763 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 GAS6Q14393 721 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 SOWAHAQ2M3V2 549 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 SDHAF4Q5VUM1 108 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 LMBRD2Q68DH5 695 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 TXNDC8Q6A555 127 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 CNNM4Q6P4Q7 775 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 TXNDC11Q6PKC3 985 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 DPH6Q7L8W6 267 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 OSTM1Q86WC4 334 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 ADGRF2Q8IZF7 708 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 GPR161Q8N6U8 529 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 ZNF507Q8TCN5 953 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 MRPS31Q92665 395 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 USP13Q92995 863 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 SNX21Q969T3 373 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 RMDN1Q96DB5 314 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 HPDLQ96IR7 371 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 PKMYT1Q99640 499 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 RBM12Q9NTZ6 932 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 TDP1Q9NUW8 608 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 HSPBP1Q9NZL4 362 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 UXTQ9UBK9 157 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 TICRRQ7Z2Z1 1910 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 TSC2P49815 1807 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 COL4A2P08572 1712 aa12.62□□□□□ -0.39
CTNNA1-237ENST00000523275 EIF3DO15371 548 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 NOL4O94818 638 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms