RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 MMEP08473 750 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 CYP11B1P15538 503 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 DNAJB1P25685 340 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 TAP1Q03518 808 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 C2CD6Q53TS8 623 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 RAD9BQ6WBX8 426 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 NOP9Q86U38 636 aaKnown RBP13.16□□□□□ -0.3
PABPC1-219ENST00000522387 METTL23Q86XA0 190 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 PALB2Q86YC2 1186 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 JAKMIP2Q96AA8 810 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 TMEM176AQ96HP8 235 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 DNAJC7Q99615 494 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 RTP3Q9BQQ7 232 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 ZSWIM1Q9BR11 485 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 TTPALQ9BTX7 342 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 NT5C1AQ9BXI3 368 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 SLC28A3Q9HAS3 691 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 ADAMTS1Q9UHI8 967 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 ADORA2BP29275 332 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 BMPR1AP36894 532 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 CYP27A1Q02318 531 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 KRT17Q04695 432 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 BMS1Q14692 1282 aaKnown RBP13.16□□□□□ -0.3
PABPC1-219ENST00000522387 CTXN3Q4LDR2 81 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 MDH1BQ5I0G3 518 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 HGSNATQ68CP4 663 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 ENOSF1Q7L5Y1 443 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 ZNF571Q7Z3V5 609 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-219ENST00000522387 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 LRRTM3Q86VH5 581 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 LZTFL1Q9NQ48 299 aa13.16□□□□□ -0.3
PABPC1-219ENST00000522387 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
PABPC1-219ENST00000522387 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 PIK3R2O00459 728 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 ADAM12O43184 909 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 ABL1P00519 1130 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 RFX1P22670 979 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 PDE6CP51160 858 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 ERVFC1P60507 584 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 USP41Q3LFD5 358 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 PPP1R26Q5T8A7 1209 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-219ENST00000522387 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-219ENST00000522387 UBR7Q8N806 425 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 STKLD1Q8NE28 680 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 UBA3Q8TBC4 463 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-219ENST00000522387 EPS8L1Q8TE68 723 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 FAM161BQ96MY7 647 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 DEF6Q9H4E7 631 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 CYP3A43Q9HB55 503 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 TMLHEQ9NVH6 421 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 CDY1Q9Y6F8 540 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 MYH10P35580 1976 aa13.15□□□□□ -0.3
PABPC1-219ENST00000522387 GABRDO14764 452 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 TACC1O75410 805 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 SPATA31D3P0C874 917 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 EIF4A3P38919 411 aaKnown RBP13.14□□□□□ -0.31
PABPC1-219ENST00000522387 CLCN6P51797 869 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 GFPT1Q06210 699 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-219ENST00000522387 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 SLC39A12Q504Y0 691 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 PLPP4Q5VZY2 271 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 SPATA31D4Q6ZUB0 917 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 B3GALNT2Q8NCR0 500 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 POF1BQ8WVV4 589 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 ZNF606Q8WXB4 792 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 NHEJ1Q9H9Q4 299 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-219ENST00000522387 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 AIPL1Q9NZN9 384 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 TFR2Q9UP52 801 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 GRM6O15303 877 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 CPB1P15086 417 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 IRS1P35568 1242 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 LHX1P48742 406 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 PHLDB2Q86SQ0 1253 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 SLC2A14Q8TDB8 520 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 GDPD5Q8WTR4 605 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 CYFIP2Q96F07 1278 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 PCED1BQ96HM7 432 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 TCF25Q9BQ70 676 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 SYT15Q9BQS2 421 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 CRTAC1Q9NQ79 661 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 ENTPD7Q9NQZ7 604 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 ST7Q9NRC1 585 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 CHORDC1Q9UHD1 332 aaPredicted RBP13.14□□□□□ -0.31
PABPC1-219ENST00000522387 MSRAQ9UJ68 235 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 NLRC5Q86WI3 1866 aa13.14□□□□□ -0.31
PABPC1-219ENST00000522387 EPOPA6NHQ4 379 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 HIDE1A8MVS5 230 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 SOAT2O75908 522 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 SOD2P04179 222 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 PTPN1P18031 435 aaKnown RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 FGFR3P22607 806 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 WARSP23381 471 aaKnown RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 YWHAEP62258 255 aaKnown RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms