RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MINDY1Q8N5J2 469 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 TSTD1Q8NFU3 115 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 PIP4K2CQ8TBX8 421 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 TBCKQ8TEA7 893 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 CNOT6LQ96LI5 555 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 GTPBP2Q9BX10 602 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 SLC46A2Q9BY10 475 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 POLMQ9NP87 494 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 DNAAF2Q9NVR5 837 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 GDAQ9Y2T3 454 aa9.75□□□□□ -0.85
TRAPPC9-212ENST00000521944 SMIM28A0A1B0GU29 152 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 SYN3O14994 580 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 TRAPPC3O43617 180 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 SLC37A4O43826 429 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 OPHN1O60890 802 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 DKK1O94907 266 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 GJA4P35212 333 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 P2RY2P41231 377 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 MCM2P49736 904 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 MCCD1P59942 119 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 EXOSC10Q01780 885 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 DUSP4Q13115 394 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 HNRNPDQ14103 355 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 MCM6Q14566 821 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 MAP7D1Q3KQU3 841 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 FBXO43Q4G163 708 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 XKR9Q5GH70 373 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 ALKAL1Q6UXT8 129 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 DNAJB7Q7Z6W7 309 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 TMEM130Q8N3G9 435 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 HDDC3Q8N4P3 179 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 TTC9BQ8N6N2 239 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 LSM14AQ8ND56 463 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 USP33Q8TEY7 942 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 TCEANC2Q96MN5 208 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 ZMAT2Q96NC0 199 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 P2RY13Q9BPV8 354 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 LXNQ9BS40 222 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 ATXN3LQ9H3M9 355 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 TPCN1Q9ULQ1 816 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 MAFFQ9ULX9 164 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 SLC6A14Q9UN76 642 aa9.74□□□□□ -0.85
TRAPPC9-212ENST00000521944 ARID2Q68CP9 1835 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 LRRK2Q5S007 2527 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 M0R2N6 131 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 SLC27A2O14975 620 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 ZBTB43O43298 467 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 SOAT2O75908 522 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 IGHDP01880 384 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 CFIP05156 583 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 SERPINF2P08697 491 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 OR4Q2P0C623 313 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 GABRR2P28476 465 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 GNA11P29992 359 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 GRM5P41594 1212 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 CYP4F8P98187 520 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 NR1H3Q13133 447 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 TFDP1Q14186 410 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 CTTNQ14247 550 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 MAPK6Q16659 721 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 FAM187BQ17R55 369 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 XKR4Q5GH76 650 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 LPCAT2Q7L5N7 544 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 USP13Q92995 863 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 UROC1Q96N76 676 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 PGLYRP2Q96PD5 576 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 CLMPQ9H6B4 373 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 TASP1Q9H6P5 420 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 NID2Q14112 1375 aa9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 MYO18AQ92614 2054 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-212ENST00000521944 A0A087WWV3 80 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 H7C4K7 107 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 K7EQS6 105 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 PODXLO00592 558 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 LCE2BO14633 110 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 ST8SIA5O15466 376 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 SLITRK3O94933 977 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 ABCG1P45844 678 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 GFPT1Q06210 699 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 DHX9Q08211 1270 aaKnown RBP9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 PTPAQ15257 358 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 CRY1Q16526 586 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 DUOXA1Q1HG43 343 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 CDCA2Q69YH5 1023 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 GLRX5Q86SX6 157 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 TMEM150AQ86TG1 271 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 SFTPA1Q8IWL2 248 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 DEFB119Q8N690 84 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 ATAD1Q8NBU5 361 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 HAS1Q92839 578 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 PSMG2Q969U7 264 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 DYDC2Q96IM9 177 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 SUSD3Q96L08 255 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 PRIMPOLQ96LW4 560 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 OCSTAMPQ9BR26 566 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 KCNMB3Q9NPA1 279 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 GPRC5CQ9NQ84 441 aa9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 KIAA1522Q9P206 1035 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC9-212ENST00000521944 ABCA12Q86UK0 2595 aa9.71□□□□□ -0.85
TRAPPC9-212ENST00000521944 AHCTF1Q8WYP5 2266 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms