RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 ARIH2O95376 493 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 TARSP26639 723 aaKnown RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 RPA3P35244 121 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 ELF3P78545 371 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 CCNG2Q16589 344 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 SLFN12LQ6IEE8 588 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 C1orf228Q6PIY5 440 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 RHBDF2Q6PJF5 856 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 DNAJC14Q6Y2X3 702 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 C15orf39Q6ZRI6 1047 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 ZBED3Q96IU2 234 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 ASCC2Q9H1I8 757 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 KIAA1586Q9HCI6 787 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 NRBP2Q9NSY0 501 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 KIAA1217Q5T5P2 1943 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 M0QYV0 167 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 PSTPIP1O43586 416 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 KRT3P12035 628 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 CTCFP49711 727 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 ALDH5A1P51649 535 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 TMEM62Q0P6H9 643 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 LAMTOR4Q0VGL1 99 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 KLF1Q13351 362 aaPredicted RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 ACCSLQ4AC99 568 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 PTPN20Q4JDL3 420 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 POTEAQ6S8J7 498 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 CTAGE3PQ8IX95 158 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 FITM2Q8N6M3 262 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 KCTD6Q8NC69 237 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 ERP27Q96DN0 273 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 STAMBPL1Q96FJ0 436 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 SMC6Q96SB8 1091 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 PCYT2Q99447 389 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 NIF3L1Q9GZT8 377 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 DHX33Q9H6R0 707 aaKnown RBP12.8□□□□□ -0.36
DENND3-217ENST00000521835 SMYD3Q9H7B4 428 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 HEY1Q9Y5J3 304 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 H0YCG3 227 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ADCY3O60266 1144 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ITGB3P05106 788 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 MMP8P22894 467 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 TBXAS1P24557 533 aaPredicted RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 MAN1A1P33908 653 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 AMHR2Q16671 573 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 DUOXA2Q1HG44 320 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 CATSPERGQ6ZRH7 1159 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 FAM228AQ86W67 206 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ZBTB8OSQ8IWT0 167 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ARMC2Q8NEN0 867 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 REPS2Q8NFH8 660 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 EXD1Q8NHP7 514 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 PYROXD1Q8WU10 500 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 ETNK1Q9HBU6 452 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 NOD2Q9HC29 1040 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 HOXC10Q9NYD6 342 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 MCM8Q9UJA3 840 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ZNFX1Q9P2E3 1918 aaKnown RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 CNTNAP2Q9UHC6 1331 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 TCRBV7S3A2A0A539 114 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 H0Y3Z8 333 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 KRT4P19013 534 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 IL1R2P27930 398 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 GBP2P32456 591 aaPredicted RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 GRIK3Q13003 919 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 FAM102AQ5T9C2 384 aaPredicted RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 KATNAL2Q8IYT4 538 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 RDM1Q8NG50 284 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 RBM41Q96IZ5 413 aaKnown RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 PDLIM7Q9NR12 457 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ADM5C9JUS6 153 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ZC3H11AO75152 810 aaKnown RBP eCLIP12.79□□□□□ -0.36
DENND3-217ENST00000521835 AVILO75366 819 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 FARP2O94887 1054 aaPredicted RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 TNNC2P02585 160 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 NFICP08651 508 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 WDR4P57081 412 aaKnown RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 YWHAGP61981 247 aaKnown RBP eCLIP12.79□□□□□ -0.36
DENND3-217ENST00000521835 VGLL4Q14135 290 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 CRYMQ14894 314 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 PLEKHA7Q6IQ23 1121 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 PIGWQ7Z7B1 504 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ZNF677Q86XU0 584 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 PALM2Q8IXS6 379 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 CFAP36Q96G28 342 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 HEXIM2Q96MH2 286 aaKnown RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 CFAP57Q96MR6 1250 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 ROPN1BQ9BZX4 212 aaPredicted RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 ROPN1Q9HAT0 212 aaPredicted RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 NPHS2Q9NP85 383 aa12.79□□□□□ -0.36
DENND3-217ENST00000521835 NGRNQ9NPE2 291 aaKnown RBP12.79□□□□□ -0.36
DENND3-217ENST00000521835 EME2A4GXA9 379 aaPredicted RBP12.78□□□□□ -0.36
DENND3-217ENST00000521835 TMEM191CA6NGB0 347 aa12.78□□□□□ -0.36
DENND3-217ENST00000521835 FAM47DPA6NHR8 397 aa12.78□□□□□ -0.36
DENND3-217ENST00000521835 ASAP2O43150 1006 aa12.78□□□□□ -0.36
DENND3-217ENST00000521835 LDHAP00338 332 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms