RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 ADALQ6DHV7 355 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 SLFN12LQ6IEE8 588 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 TCEAL6Q6IPX3 200 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 GPBP1Q86WP2 473 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 FSIP1Q8NA03 581 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
MRPS28-206ENST00000520946 CD101Q93033 1021 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 TCEAL3Q969E4 200 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 MMTAG2Q9BU76 263 aaKnown RBP12.41□□□□□ -0.42
MRPS28-206ENST00000520946 HAPLN2Q9GZV7 340 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 ASB7Q9H672 318 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 PARVGQ9HBI0 331 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 HPS4Q9NQG7 708 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 DPP3Q9NY33 737 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 ODF2LQ9ULJ1 636 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 INVSQ9Y283 1065 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 CNOT1A5YKK6 2376 aaKnown RBP12.41□□□□□ -0.42
MRPS28-206ENST00000520946 GREB1Q4ZG55 1949 aa12.41□□□□□ -0.42
MRPS28-206ENST00000520946 MYH11P35749 1972 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 TRAV19A0A0A6YYK7 116 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 SOBPA7XYQ1 873 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 PIRO00625 290 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 DCLK1O15075 740 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 MAP3K13O43283 966 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 TRAK2O60296 914 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 CKMP06732 381 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 USP17L7P0C7H9 530 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 UBA7P41226 1012 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 ACOT2P49753 483 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 TOB1P50616 345 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-206ENST00000520946 SLC12A3P55017 1021 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 ZNF252P-AS1Q0IIN9 211 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 ST3GAL1Q11201 340 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 IL17AQ16552 155 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 UAP1L1Q3KQV9 507 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 UNQ6494/PRO21346Q6UXR6 183 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 SYT13Q7L8C5 426 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 MON1AQ86VX9 555 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 ATP2A3Q93084 1043 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 ZNF560Q96MR9 790 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 PI4K2AQ9BTU6 479 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 DUSP15Q9H1R2 295 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-206ENST00000520946 CPSF3Q9UKF6 684 aaKnown RBP12.4□□□□□ -0.42
MRPS28-206ENST00000520946 RALYQ9UKM9 306 aaKnown RBP12.4□□□□□ -0.42
MRPS28-206ENST00000520946 CCL26Q9Y258 94 aa12.4□□□□□ -0.42
MRPS28-206ENST00000520946 SPAG17Q6Q759 2223 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 ATG2BQ96BY7 2078 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 A0A0B4J269 797 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 BCLAF3A2AJT9 711 aaKnown RBP12.39□□□□□ -0.43
MRPS28-206ENST00000520946 KPNA7A9QM74 516 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 H3BQV1 296 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 HUS1O60921 280 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 ALDH1A2O94788 518 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 GJA4P35212 333 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 PNPLA4P41247 253 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 DHPSP49366 369 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-206ENST00000520946 MYL7Q01449 175 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 FAM160A1Q05DH4 1040 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 KCNB1Q14721 858 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 MTF1Q14872 753 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 HYIQ5T013 277 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 SH3PXD2AQ5TCZ1 1133 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 CYP2U1Q7Z449 544 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 OSCP1Q8WVF1 389 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 CHFRQ96EP1 664 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 PNMA5Q96PV4 448 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 REEP2Q9BRK0 252 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 ECT2Q9H8V3 914 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 TMEM9BQ9NQ34 198 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
MRPS28-206ENST00000520946 POLR3BQ9NW08 1133 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-206ENST00000520946 AGO2Q9UKV8 859 aaKnown RBP12.39□□□□□ -0.43
MRPS28-206ENST00000520946 ZMIZ1Q9ULJ6 1067 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 C2CD2Q9Y426 696 aa12.39□□□□□ -0.43
MRPS28-206ENST00000520946 NUP210Q8TEM1 1887 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-206ENST00000520946 ANO9A1A5B4 782 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 OTOL1A6NHN0 477 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 C1QTNF9BB2RNN3 333 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 F11P03951 625 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 C1QTNF9P0C862 333 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 PDE6CP51160 858 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 SEC13P55735 322 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 ZNF268Q14587 947 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 POSTNQ15063 836 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 C2orf27AQ580R0 203 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 SDHAF4Q5VUM1 108 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 LRRTM3Q86VH5 581 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 SPATA2LQ8IUW3 424 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 SCN4BQ8IWT1 228 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 KRI1Q8N9T8 703 aaKnown RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 NOC3LQ8WTT2 800 aaKnown RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 CACTINQ8WUQ7 758 aaKnown RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 POMGNT1Q8WZA1 660 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 PIGKQ92643 395 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 TPSD1Q9BZJ3 242 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 SLC32A1Q9H598 525 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 FBRSL1Q9HCM7 1045 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms