RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 HDAC10Q969S8 669 aa5.42□□□□□ -1.54
CLK4-207ENST00000520909 OSBPL9Q96SU4 736 aa5.42□□□□□ -1.54
CLK4-207ENST00000520909 AMBRA1Q9C0C7 1298 aa5.42□□□□□ -1.54
CLK4-207ENST00000520909 SLKQ9H2G2 1235 aaPredicted RBP5.42□□□□□ -1.54
CLK4-207ENST00000520909 SH3BP4Q9P0V3 963 aa5.42□□□□□ -1.54
CLK4-207ENST00000520909 KIF15Q9NS87 1388 aa5.42□□□□□ -1.54
CLK4-207ENST00000520909 SHANK2Q9UPX8 1470 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 GLI2P10070 1586 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 POLRMTO00411 1230 aaKnown RBP5.41□□□□□ -1.54
CLK4-207ENST00000520909 SGTAO43765 313 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 CYP2D6P10635 497 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 NDUFV1P49821 464 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 RAB39AQ14964 217 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 PROSER3Q2NL68 480 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 GADL1Q6ZQY3 521 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 ZNF551Q7Z340 670 aaPredicted RBP5.41□□□□□ -1.54
CLK4-207ENST00000520909 WDR66Q8TBY9 1149 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 QTRT1Q9BXR0 403 aaKnown RBP5.41□□□□□ -1.54
CLK4-207ENST00000520909 ACTRT3Q9BYD9 372 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 DHX57Q6P158 1386 aaKnown RBP5.41□□□□□ -1.54
CLK4-207ENST00000520909 ADGRL2O95490 1459 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 NEO1Q92859 1461 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 ABCC1P33527 1531 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 DIP2BQ9P265 1576 aa5.41□□□□□ -1.54
CLK4-207ENST00000520909 DENND4BO75064 1496 aaPredicted RBP5.4□□□□□ -1.55
CLK4-207ENST00000520909 EYA4O95677 639 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 TBCCQ15814 346 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 CLUL1Q15846 466 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 WASF1Q92558 559 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 WACQ9BTA9 647 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 ANLNQ9NQW6 1124 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 ARHGEF3Q9NR81 526 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 DKK3Q9UBP4 350 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 ANKRD50Q9ULJ7 1429 aa5.4□□□□□ -1.55
CLK4-207ENST00000520909 RTEL1-TNFRSF6BF6WH68 1400 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 PPEF2O14830 753 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 GPR39O43194 453 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 CEP78Q5JTW2 689 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 PRAMEF17Q5VTA0 474 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 ZNF517Q6ZMY9 492 aaPredicted RBP5.39□□□□□ -1.55
CLK4-207ENST00000520909 LHFPL2Q6ZUX7 228 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 SLC29A4Q7RTT9 530 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 SPATS2Q86XZ4 545 aaKnown RBP5.39□□□□□ -1.55
CLK4-207ENST00000520909 FANCBQ8NB91 859 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 SCAMP4Q969E2 229 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 RGMAQ96B86 450 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 SH2D3AQ9BRG2 576 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 CALCOCO1Q9P1Z2 691 aa5.39□□□□□ -1.55
CLK4-207ENST00000520909 KDM6BO15054 1643 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 MAP3K4Q9Y6R4 1608 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 CFAP74Q9C0B2 1584 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 ZNF518AQ6AHZ1 1483 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 TEX14Q8IWB6 1497 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 POGZQ7Z3K3 1410 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 NUP155O75694 1391 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 CLSPNQ9HAW4 1339 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 E9PLN8 166 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 SOAT2O75908 522 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 NXPH3O95157 252 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 TUBB4AP04350 444 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 CBSLP0DN79 551 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 CBSP35520 551 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 MMP13P45452 471 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 ALDH9A1P49189 494 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 SLC16A1P53985 500 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 FOXG1P55316 489 aaPredicted RBP5.38□□□□□ -1.55
CLK4-207ENST00000520909 ERVK-21P61565 698 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 SUPT20HL1Q3ZLR7 823 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 PDSS2Q86YH6 399 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 ATRIPQ8WXE1 791 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 TBC1D5Q92609 795 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 CLPTM1LQ96KA5 538 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 MRGPRX4Q96LA9 322 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 VKORC1Q9BQB6 163 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.38□□□□□ -1.55
CLK4-207ENST00000520909 CROCC2H7BZ55 1655 aa5.38□□□□□ -1.55
CLK4-207ENST00000520909 MAST1Q9Y2H9 1570 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 TSPOAP1O95153 1857 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 TISP43B9A030 160 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 SMIM22K7EJ46 135 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 KIF3BO15066 747 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 NDUFS2O75306 463 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 NTN1O95631 604 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 LPOP22079 712 aaPredicted RBP5.37□□□□□ -1.55
CLK4-207ENST00000520909 TLE1Q04724 770 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 KLF1Q13351 362 aaPredicted RBP5.37□□□□□ -1.55
CLK4-207ENST00000520909 KLHL22Q53GT1 634 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 RNF219Q5W0B1 726 aaPredicted RBP5.37□□□□□ -1.55
CLK4-207ENST00000520909 AWAT2Q6E213 333 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 PPP4R3AQ6IN85 833 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 ANKRD16Q6P6B7 361 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 CRELD2Q6UXH1 353 aaPredicted RBP5.37□□□□□ -1.55
CLK4-207ENST00000520909 REPS1Q96D71 796 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 SIN3AQ96ST3 1273 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 BRD9Q9H8M2 597 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 MAN1C1Q9NR34 630 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 ELOVL5Q9NYP7 299 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 ADGBQ8N7X0 1667 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 DUOX2Q9NRD8 1548 aa5.37□□□□□ -1.55
CLK4-207ENST00000520909 DHX29Q7Z478 1369 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms