RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CISHQ9NSE2 258 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 CNTN6Q9UQ52 1028 aa16.34■□□□□ 0.21
LSM1-203ENST00000520755 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.34■□□□□ 0.21
LSM1-203ENST00000520755 LRRC53A6NM62 1247 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 GABRDO14764 452 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 TGM5O43548 720 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 MFAP3LO75121 409 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 CILPO75339 1184 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 GLUD1P00367 558 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 WARSP23381 471 aaKnown RBP16.33■□□□□ 0.2
LSM1-203ENST00000520755 LHX1P48742 406 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 MFAP3P55082 362 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 ROR1Q01973 937 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 RAB33AQ14088 237 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 ARID5BQ14865 1188 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 SLC8B1Q6J4K2 584 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 OR6B3Q8NGW1 331 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 SPATA18Q8TC71 538 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 SLC22A17Q8WUG5 538 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 CPLX3Q8WVH0 158 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 IQCDQ96DY2 449 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 OXCT2Q9BYC2 517 aaPredicted RBP16.33■□□□□ 0.2
LSM1-203ENST00000520755 ELOVL4Q9GZR5 314 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 GREB1Q4ZG55 1949 aa16.33■□□□□ 0.2
LSM1-203ENST00000520755 WDR27A2RRH5 827 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 FOXN3O00409 490 aaPredicted RBP16.32■□□□□ 0.2
LSM1-203ENST00000520755 NCK2O43639 380 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 GLP2RO95838 553 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 CALCAP01258 141 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 PDGFRBP09619 1106 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 SRGAP2BP0DMP2 458 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 LMO2P25791 158 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 GNL1P36915 607 aaPredicted RBP16.32■□□□□ 0.2
LSM1-203ENST00000520755 CDR1P51861 262 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 TSPY1Q01534 308 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 ORC1Q13415 861 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 ADAM15Q13444 863 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 CCDC142Q17RM4 750 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 CACNA2D4Q7Z3S7 1137 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 FAM71AQ8IYT1 594 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 TC2NQ8N9U0 490 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 RBBP8NLQ8NC74 664 aaPredicted RBP16.32■□□□□ 0.2
LSM1-203ENST00000520755 CASP10Q92851 521 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 JAKMIP2Q96AA8 810 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 PABPC5Q96DU9 382 aaKnown RBP16.32■□□□□ 0.2
LSM1-203ENST00000520755 FAM81BQ96LP2 452 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 PGLYRP2Q96PD5 576 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 DPEP3Q9H4B8 488 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 ACP6Q9NPH0 428 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 MAN1C1Q9NR34 630 aa16.32■□□□□ 0.2
LSM1-203ENST00000520755 BARX2Q9UMQ3 279 aaPredicted RBP16.32■□□□□ 0.2
LSM1-203ENST00000520755 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 A8MXQ7 604 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 PCSK1P29120 753 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 SOX5P35711 763 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 NDST1P52848 882 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 RAD23BP54727 409 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 ADKP55263 362 aaKnown RBP16.31■□□□□ 0.2
LSM1-203ENST00000520755 PSMC1P62191 440 aaKnown RBP16.31■□□□□ 0.2
LSM1-203ENST00000520755 ZBED6P86452 979 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 KCNC3Q14003 757 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 CTC1Q2NKJ3 1217 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 SLC39A12Q504Y0 691 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 TMEM270Q6UE05 265 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 RNF19BQ6ZMZ0 732 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 DRC7Q8IY82 874 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 ZNF461Q8TAF7 563 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 OLIG1Q8TAK6 271 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 DNAJC7Q99615 494 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 SYT15Q9BQS2 421 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 ACBD6Q9BR61 282 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 ZCWPW1Q9H0M4 648 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 FAM124BQ9H5Z6 455 aaPredicted RBP16.31■□□□□ 0.2
LSM1-203ENST00000520755 MYO6Q9UM54 1294 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 PCDHB4Q9Y5E5 795 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 MYO16Q9Y6X6 1858 aa16.31■□□□□ 0.2
LSM1-203ENST00000520755 ATP2C2O75185 946 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 TBX10O75333 385 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 GFPT2O94808 682 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 FAM163BP0C2L3 166 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 KRT5P13647 590 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 CLCN1P35523 988 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 KRT9P35527 623 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 YWHAEP62258 255 aaKnown RBP16.3■□□□□ 0.2
LSM1-203ENST00000520755 DLX2Q07687 328 aaPredicted RBP16.3■□□□□ 0.2
LSM1-203ENST00000520755 GPR17Q13304 367 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 ZNF394Q53GI3 561 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 INTS6LQ5JSJ4 861 aaKnown RBP16.3■□□□□ 0.2
LSM1-203ENST00000520755 LILRA6Q6PI73 481 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 DCP1BQ8IZD4 617 aaKnown RBP16.3■□□□□ 0.2
LSM1-203ENST00000520755 SLC4A11Q8NBS3 891 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 KREMEN2Q8NCW0 462 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 LPIN3Q9BQK8 851 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 ABHD10Q9NUJ1 306 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 IMPACTQ9P2X3 320 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 FBXW11Q9UKB1 542 aa16.3■□□□□ 0.2
LSM1-203ENST00000520755 CDH9Q9ULB4 789 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms