RNA–Protein interactions for RNA: ENST00000519712.1

NSMCE2-207, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-207ENST00000519712 PSMD6Q15008 389 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 SNRNP35Q16560 246 aaKnown RBP12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 SOWAHAQ2M3V2 549 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 FOXD4L6Q3SYB3 417 aaPredicted RBP12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 MGAT5BQ3V5L5 792 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 CFAP221Q4G0U5 840 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 FOXD4L3Q6VB84 417 aaPredicted RBP12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 FRMD5Q7Z6J6 570 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 TMEM150AQ86TG1 271 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 OSTM1Q86WC4 334 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 ADGRF2Q8IZF7 708 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 KBTBD7Q8WVZ9 684 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 MSANTD3Q96H12 275 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 FUBP3Q96I24 572 aaKnown RBP eCLIP12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 CGRRF1Q99675 332 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 BLZF1Q9H2G9 400 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 BRD9Q9H8M2 597 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 DDX43Q9NXZ2 648 aaKnown RBP12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 PCDHB5Q9Y5E4 795 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
NSMCE2-207ENST00000519712 EP300Q09472 2414 aaPredicted RBP12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 FAM170BA6NMN3 283 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 SOBPA7XYQ1 873 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 MAN2B1O00754 1011 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 STAU1O95793 577 aaKnown RBP12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 TNNC2P02585 160 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 F11P03951 625 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 MYL1P05976 194 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 CMA1P23946 247 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 PCSK1P29120 753 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 GDI1P31150 447 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 LHX1P48742 406 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 MYL7Q01449 175 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 CYP24A1Q07973 514 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 MYO1EQ12965 1108 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 UBXN2BQ14CS0 331 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 DUOXA2Q1HG44 320 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 ZNF528Q3MIS6 628 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 FAM171BQ6P995 826 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 ZNF852Q6ZMS4 543 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 MAMSTRQ6ZN01 415 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 HS2ST1Q7LGA3 356 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 ARID3BQ8IVW6 561 aaPredicted RBP12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 XXYLT1Q8NBI6 393 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 NELL1Q92832 810 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 NKD2Q969F2 451 aaPredicted RBP12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 IER2Q9BTL4 223 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 BCO2Q9BYV7 579 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 ATXN3LQ9H3M9 355 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 SEMA4AQ9H3S1 761 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 SLITRK6Q9H5Y7 841 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 TASP1Q9H6P5 420 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 ABI2Q9NYB9 513 aaPredicted RBP12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 USP25Q9UHP3 1055 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 SERTAD1Q9UHV2 236 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 FBXO4Q9UKT5 387 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 MRPS17Q9Y2R5 130 aaKnown RBP12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
NSMCE2-207ENST00000519712 ANAPC1Q9H1A4 1944 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 PRPF40AO75400 957 aaKnown RBP12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 TADA3O75528 432 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 NOL4O94818 638 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 PRAMEF12O95522 483 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 KRT19P08727 400 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 FAM163BP0C2L3 166 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 SP9P0CG40 484 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 CSH1P0DML2 217 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 CSH2P0DML3 217 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 PFKFB1P16118 471 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 CD72P21854 359 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 WARSP23381 471 aaKnown RBP12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 DDX6P26196 483 aaKnown RBP eCLIP12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 MAGEA11P43364 429 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 AFMP43652 599 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 CYP4F8P98187 520 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 KNOP1Q1ED39 458 aaKnown RBP12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 ARHGAP15Q53QZ3 475 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 GPR158Q5T848 1215 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 C1orf228Q6PIY5 440 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 TRAPPC11Q7Z392 1133 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 SLC9A9Q8IVB4 645 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 NELFCDQ8IXH7 590 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 GRAMD1CQ8IYS0 662 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 CEP57L1Q8IYX8 460 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 TRMT2BQ96GJ1 504 aaKnown RBP12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 PAGE5Q96GU1 130 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 HPDLQ96IR7 371 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 MYRFLQ96LU7 910 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 CFAP54Q96N23 3096 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 LRRC3BQ96PB8 259 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 PI4K2AQ9BTU6 479 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 CHRDQ9H2X0 955 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 SLC39A2Q9NP94 309 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 PRMT8Q9NR22 394 aaPredicted RBP12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 GPR179Q6PRD1 2367 aa12.07□□□□□ -0.48
NSMCE2-207ENST00000519712 ZNF263O14978 683 aa12.06□□□□□ -0.48
NSMCE2-207ENST00000519712 CLIC2O15247 247 aa12.06□□□□□ -0.48
NSMCE2-207ENST00000519712 NCAM2O15394 837 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms