RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 LATS2Q9NRM7 1088 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 MAGEC2Q9UBF1 373 aaPredicted RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 MTRRQ9UBK8 725 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 GSTTP1A0A1W2PQM5 241 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 WDR27A2RRH5 827 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 FAM47DPA6NHR8 397 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 MEIS1O00470 390 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 PAPSS2O95340 614 aaPredicted RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 ARIH2O95376 493 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 HOXD8P13378 290 aaPredicted RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 ENGP17813 658 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 SGCGQ13326 291 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 ARHGEF7Q14155 803 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 EIF4HQ15056 248 aaKnown RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 TRIM71Q2Q1W2 868 aaKnown RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 COL28A1Q2UY09 1125 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 MCTP1Q6DN14 999 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 TSSK4Q6SA08 328 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 MOXD1Q6UVY6 613 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 ZSCAN30Q86W11 494 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 TMC2Q8TDI7 906 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 TRAPPC12Q8WVT3 735 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 CEP295NLQ96MC4 621 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 POLR3FQ9H1D9 316 aaPredicted RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 LRRC4Q9HBW1 653 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 AGO4Q9HCK5 861 aaKnown RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 ZNF334Q9HCZ1 680 aaPredicted RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 SLAMF7Q9NQ25 335 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 AGPAT5Q9NUQ2 364 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 RGL1Q9NZL6 768 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 HOOK1Q9UJC3 728 aaKnown RBP3.06□□□□□ -1.92
EFR3A-202ENST00000519656 PCDHB8Q9UN66 801 aa3.06□□□□□ -1.92
EFR3A-202ENST00000519656 ZNF646O15015 1829 aaPredicted RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 ZMYM6O95789 1325 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 SPAARA0A1B0GVQ0 90 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 HEATR9A2RTY3 570 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 ANKRD62A6NC57 917 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 TAF4O00268 1085 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 GFRA2O00451 464 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 FSBPO95073 299 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 MCF2P10911 925 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 CD1EP15812 388 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 SDSP20132 328 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 HARS2P49590 506 aaKnown RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 RBP5P82980 135 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 EXOSC10Q01780 885 aaKnown RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 RING1Q06587 406 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 CCDC173Q0VFZ6 552 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 COL19A1Q14993 1142 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 C10orf76Q5T2E6 689 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 VSTM1Q6UX27 236 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 DNAJB7Q7Z6W7 309 aaPredicted RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 BLIDQ8IZY5 108 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 BBS5Q8N3I7 341 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 CCDC33Q8N5R6 958 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 ZNF513Q8N8E2 541 aaPredicted RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 AVL9Q8NBF6 648 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 BCL7CQ8WUZ0 217 aaPredicted RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 HHIPQ96QV1 700 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 TRAIPQ9BWF2 469 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 MIS12Q9H081 205 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 RIOX1Q9H6W3 641 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 GAREM1Q9H706 876 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 USP29Q9HBJ7 922 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 ADAMTS1Q9UHI8 967 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 CLCA2Q9UQC9 943 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 YIPF1Q9Y548 306 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 SPG11Q96JI7 2443 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 IGKV6D-41A0A0C4DH26 115 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 ACKR2O00590 384 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 PODXLO00592 558 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 SMARCA5O60264 1052 aaPredicted RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 KLF8O95600 359 aaPredicted RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 PYGBP11216 843 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 HTR1BP28222 390 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 EIF2DP41214 584 aaKnown RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 HMGN5P82970 282 aaKnown RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 RBPJQ06330 500 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 VAC14Q08AM6 782 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 MON1AQ86VX9 555 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 ZNF354CQ86Y25 554 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 SIRT2Q8IXJ6 389 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 SUMF1Q8NBK3 374 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 EXOC6Q8TAG9 804 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 N4BP2L2Q92802 583 aaPredicted RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 LRRC45Q96CN5 670 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 MED8Q96G25 268 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 HSPA12BQ96MM6 686 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 LHX5Q9H2C1 402 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 KLK14Q9P0G3 267 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 ANAPC2Q9UJX6 822 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 KAT6AQ92794 2004 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 FSCN2O14926 492 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 PRPF3O43395 683 aaKnown RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 MAFO75444 373 aaPredicted RBP3.05□□□□□ -1.92
EFR3A-202ENST00000519656 RFPL3O75679 317 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 IL18RAPO95256 599 aa3.05□□□□□ -1.92
EFR3A-202ENST00000519656 ASLP04424 464 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms