RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TMEM176AQ96HP8 235 aa15.05■□□□□ -0
SDC2-203ENST00000519587 GPR88Q9GZN0 384 aa15.05■□□□□ -0
SDC2-203ENST00000519587 FNIP2Q9P278 1114 aa15.05■□□□□ -0
SDC2-203ENST00000519587 HMGXB4Q9UGU5 601 aa15.05■□□□□ -0
SDC2-203ENST00000519587 CHD9Q3L8U1 2897 aa15.04■□□□□ -0
SDC2-203ENST00000519587 MYO9BQ13459 2157 aa15.04■□□□□ -0
SDC2-203ENST00000519587 FOXN3O00409 490 aaPredicted RBP15.04■□□□□ -0
SDC2-203ENST00000519587 CYP26A1O43174 497 aa15.04■□□□□ -0
SDC2-203ENST00000519587 ADH1AP07327 375 aa15.04■□□□□ -0
SDC2-203ENST00000519587 PTPN1P18031 435 aaKnown RBP15.04■□□□□ -0
SDC2-203ENST00000519587 ACAT1P24752 427 aaKnown RBP15.04■□□□□ -0
SDC2-203ENST00000519587 GNA15P30679 374 aa15.04■□□□□ -0
SDC2-203ENST00000519587 NFE2Q16621 373 aaPredicted RBP15.04■□□□□ -0
SDC2-203ENST00000519587 ZNF394Q53GI3 561 aa15.04■□□□□ -0
SDC2-203ENST00000519587 SGO2Q562F6 1265 aa15.04■□□□□ -0
SDC2-203ENST00000519587 PLPP4Q5VZY2 271 aa15.04■□□□□ -0
SDC2-203ENST00000519587 SLC8B1Q6J4K2 584 aa15.04■□□□□ -0
SDC2-203ENST00000519587 C4orf50Q6ZRC1 276 aa15.04■□□□□ -0
SDC2-203ENST00000519587 ACOT1Q86TX2 421 aa15.04■□□□□ -0
SDC2-203ENST00000519587 CRYBG2Q8N1P7 616 aa15.04■□□□□ -0
SDC2-203ENST00000519587 SLC4A11Q8NBS3 891 aa15.04■□□□□ -0
SDC2-203ENST00000519587 LNX1Q8TBB1 728 aaPredicted RBP15.04■□□□□ -0
SDC2-203ENST00000519587 WHAMMQ8TF30 809 aa15.04■□□□□ -0
SDC2-203ENST00000519587 HEXIM2Q96MH2 286 aaKnown RBP15.04■□□□□ -0
SDC2-203ENST00000519587 DNAJC7Q99615 494 aa15.04■□□□□ -0
SDC2-203ENST00000519587 ELOVL4Q9GZR5 314 aa15.04■□□□□ -0
SDC2-203ENST00000519587 ZCWPW1Q9H0M4 648 aa15.04■□□□□ -0
SDC2-203ENST00000519587 TTYH1Q9H313 450 aaPredicted RBP15.04■□□□□ -0
SDC2-203ENST00000519587 IRAK3Q9Y616 596 aa15.04■□□□□ -0
SDC2-203ENST00000519587 BZW2Q9Y6E2 419 aaKnown RBP15.04■□□□□ -0
SDC2-203ENST00000519587 CDY1Q9Y6F8 540 aa15.04■□□□□ -0
SDC2-203ENST00000519587 MYH10P35580 1976 aa15.04■□□□□ -0
SDC2-203ENST00000519587 ATG2AQ2TAZ0 1938 aa15.04■□□□□ -0
SDC2-203ENST00000519587 FSCN2O14926 492 aa15.03■□□□□ -0
SDC2-203ENST00000519587 THAP12O43422 761 aa15.03■□□□□ -0
SDC2-203ENST00000519587 CXCL14O95715 111 aa15.03■□□□□ -0
SDC2-203ENST00000519587 PNMA6AP0CW24 399 aaPredicted RBP15.03■□□□□ -0
SDC2-203ENST00000519587 VDRP11473 427 aa15.03■□□□□ -0
SDC2-203ENST00000519587 LMO2P25791 158 aa15.03■□□□□ -0
SDC2-203ENST00000519587 PSMC1P62191 440 aaKnown RBP15.03■□□□□ -0
SDC2-203ENST00000519587 ARID5AQ03989 594 aa15.03■□□□□ -0
SDC2-203ENST00000519587 MDH1BQ5I0G3 518 aa15.03■□□□□ -0
SDC2-203ENST00000519587 TPGS2Q68CL5 300 aa15.03■□□□□ -0
SDC2-203ENST00000519587 ELMSAN1Q6PJG2 1045 aa15.03■□□□□ -0
SDC2-203ENST00000519587 OR10T2Q8NGX3 314 aa15.03■□□□□ -0
SDC2-203ENST00000519587 MYCBPAPQ8TBZ2 947 aa15.03■□□□□ -0
SDC2-203ENST00000519587 C2orf15Q8WU43 125 aaKnown RBP15.03■□□□□ -0
SDC2-203ENST00000519587 TWNKQ96RR1 684 aa15.03■□□□□ -0
SDC2-203ENST00000519587 RTP3Q9BQQ7 232 aa15.03■□□□□ -0
SDC2-203ENST00000519587 DPEP3Q9H4B8 488 aa15.03■□□□□ -0
SDC2-203ENST00000519587 RXFP1Q9HBX9 757 aa15.03■□□□□ -0
SDC2-203ENST00000519587 ABHD10Q9NUJ1 306 aa15.03■□□□□ -0
SDC2-203ENST00000519587 AIPL1Q9NZN9 384 aa15.03■□□□□ -0
SDC2-203ENST00000519587 CDH23Q9H251 3354 aa15.02■□□□□ -0
SDC2-203ENST00000519587 PTPRDP23468 1912 aa15.02■□□□□ -0
SDC2-203ENST00000519587 NRDCO43847 1150 aa15.02■□□□□ -0
SDC2-203ENST00000519587 TBC1D4O60343 1298 aa15.02■□□□□ -0
SDC2-203ENST00000519587 OR1D2P34982 312 aa15.02■□□□□ -0
SDC2-203ENST00000519587 ARPP19P56211 112 aa15.02■□□□□ -0
SDC2-203ENST00000519587 SLC8A3P57103 927 aa15.02■□□□□ -0
SDC2-203ENST00000519587 ROR1Q01973 937 aa15.02■□□□□ -0
SDC2-203ENST00000519587 KLHL30Q0D2K2 578 aa15.02■□□□□ -0
SDC2-203ENST00000519587 ORC1Q13415 861 aa15.02■□□□□ -0
SDC2-203ENST00000519587 ARID5BQ14865 1188 aa15.02■□□□□ -0
SDC2-203ENST00000519587 SLC39A12Q504Y0 691 aa15.02■□□□□ -0
SDC2-203ENST00000519587 TDRD12Q587J7 1177 aaKnown RBP15.02■□□□□ -0
SDC2-203ENST00000519587 VPS36Q86VN1 386 aa15.02■□□□□ -0
SDC2-203ENST00000519587 ZNF677Q86XU0 584 aa15.02■□□□□ -0
SDC2-203ENST00000519587 SPATA2LQ8IUW3 424 aaPredicted RBP15.02■□□□□ -0
SDC2-203ENST00000519587 MRPL43Q8N983 215 aaKnown RBP15.02■□□□□ -0
SDC2-203ENST00000519587 AUTS2Q8WXX7 1259 aa15.02■□□□□ -0
SDC2-203ENST00000519587 MRPL38Q96DV4 380 aaKnown RBP15.02■□□□□ -0
SDC2-203ENST00000519587 FUBP3Q96I24 572 aaKnown RBP eCLIP15.02■□□□□ -0
SDC2-203ENST00000519587 PANX2Q96RD6 677 aa15.02■□□□□ -0
SDC2-203ENST00000519587 MED10Q9BTT4 135 aa15.02■□□□□ -0
SDC2-203ENST00000519587 ABCB6Q9NP58 842 aa15.02■□□□□ -0
SDC2-203ENST00000519587 FAM49BQ9NUQ9 324 aa15.02■□□□□ -0
SDC2-203ENST00000519587 HESX1Q9UBX0 185 aa15.02■□□□□ -0
SDC2-203ENST00000519587 MAFFQ9ULX9 164 aa15.02■□□□□ -0
SDC2-203ENST00000519587 CEP83Q9Y592 693 aa15.02■□□□□ -0
SDC2-203ENST00000519587 C2orf71A6NGG8 1288 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 TEX28O15482 410 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 HCRTO43612 131 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 CSPG5O95196 566 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 SERPING1P05155 500 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 PTMAP06454 111 aaKnown RBP15.01□□□□□ -0.01
SDC2-203ENST00000519587 CYP11B1P15538 503 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 RPL17P18621 184 aaKnown RBP15.01□□□□□ -0.01
SDC2-203ENST00000519587 DNAJB1P25685 340 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 HNRNPH3P31942 346 aaKnown RBP15.01□□□□□ -0.01
SDC2-203ENST00000519587 CLCN1P35523 988 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 ADKP55263 362 aaKnown RBP15.01□□□□□ -0.01
SDC2-203ENST00000519587 ERVFC1P60507 584 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 CYP27A1Q02318 531 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 CCDC173Q0VFZ6 552 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 GPR17Q13304 367 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 RAB33AQ14088 237 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 MEA1Q16626 185 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 ARHGAP17Q68EM7 881 aa15.01□□□□□ -0.01
SDC2-203ENST00000519587 SLC47A2Q86VL8 602 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms