RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CGRRF1Q99675 332 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 PI4K2AQ9BTU6 479 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 DDX23Q9BUQ8 820 aaKnown RBP10.03□□□□□ -0.8
HDAC3-215ENST00000519474 TBC1D17Q9HA65 648 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 EXOC1Q9NV70 894 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 ABI2Q9NYB9 513 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-215ENST00000519474 DLGAP2Q9P1A6 1054 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 MTF2Q9Y483 593 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-215ENST00000519474 NME7Q9Y5B8 376 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 PCDHB5Q9Y5E4 795 aa10.03□□□□□ -0.8
HDAC3-215ENST00000519474 PRPF40AO75400 957 aaKnown RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 DCNP07585 359 aaKnown RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 PDGFRBP09619 1106 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 CD72P21854 359 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 WARSP23381 471 aaKnown RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 GABRR2P28476 465 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 GPR15P49685 360 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 PTPN5P54829 565 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 MYL6P60660 151 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 DLG4P78352 724 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 NUCB2P80303 420 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 MYL7Q01449 175 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 FZD5Q13467 585 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 KCNB1Q14721 858 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 NFE2Q16621 373 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 DDR2Q16832 855 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 CCDC142Q17RM4 750 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 INTS6LQ5JSJ4 861 aaKnown RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 STXBP5Q5T5C0 1151 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 SDHAF4Q5VUM1 108 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 TMEM150AQ86TG1 271 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 ITIH5Q86UX2 942 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 MFSD6LQ8IWD5 586 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 FMR1NBQ8N0W7 255 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 DTWD2Q8NBA8 298 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 ENGASEQ8NFI3 743 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 GOLGA5Q8TBA6 731 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 ZSCAN18Q8TBC5 510 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 RSPRY1Q96DX4 576 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 SEPT5Q99719 369 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 MRPL45Q9BRJ2 306 aaKnown RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 TRMT61BQ9BVS5 477 aaKnown RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 SLC46A2Q9BY10 475 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 XYLT2Q9H1B5 865 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 ATXN3LQ9H3M9 355 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 ARHGEF3Q9NR81 526 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 MAPK8IP1Q9UQF2 711 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 TRAF3IP3Q9Y228 551 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 SIT1Q9Y3P8 196 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 R3HCC1Q9Y3T6 440 aaKnown RBP10.02□□□□□ -0.81
HDAC3-215ENST00000519474 NCANO14594 1321 aa10.02□□□□□ -0.81
HDAC3-215ENST00000519474 KANSL1LA0AUZ9 987 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 LRRIQ3A6PVS8 624 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-215ENST00000519474 HEPACAM2A8MVW5 462 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 LRRN2O75325 713 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 TACC1O75410 805 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 VNN1O95497 513 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 STAU1O95793 577 aaKnown RBP10.01□□□□□ -0.81
HDAC3-215ENST00000519474 GLULP15104 373 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 PSMC3P17980 439 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 PCSK1P29120 753 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 WEE1P30291 646 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 GNL1P36915 607 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-215ENST00000519474 MCCD1P59942 119 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-215ENST00000519474 TSPY1Q01534 308 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 PFKPQ01813 784 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 PRKCQQ04759 706 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 GRM2Q14416 872 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 MLF2Q15773 248 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-215ENST00000519474 WDR72Q3MJ13 1102 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 C1orf220Q5T0J3 134 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 GPR158Q5T848 1215 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 CCDC105Q8IYK2 499 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 ADGRF2Q8IZF7 708 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 FAM200AQ8TCP9 573 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 TMC2Q8TDI7 906 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 ELMO3Q96BJ8 720 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 SHDQ96IW2 340 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 MMS19Q96T76 1030 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 FOXQ1Q9C009 403 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 IRF2BPLQ9H1B7 796 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 TASP1Q9H6P5 420 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 CRTAC1Q9NQ79 661 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 TRPV5Q9NQA5 729 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 MAGEC2Q9UBF1 373 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-215ENST00000519474 CDH9Q9ULB4 789 aa10.01□□□□□ -0.81
HDAC3-215ENST00000519474 KMT2EQ8IZD2 1858 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 FAM170BA6NMN3 283 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 PHACTR2O75167 634 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 FGF19O95750 216 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 NR3C1P04150 777 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 CSH1P0DML2 217 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 CSH2P0DML3 217 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 PTPN1P18031 435 aaKnown RBP10□□□□□ -0.81
HDAC3-215ENST00000519474 GDI1P31150 447 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 ATICP31939 592 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 MRE11P49959 708 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 CDH8P55286 799 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 NLRP12P59046 1061 aa10□□□□□ -0.81
HDAC3-215ENST00000519474 RPL10AP62906 217 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms