RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 TIMM13Q9Y5L4 95 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-203ENST00000517921 NCANO14594 1321 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 ZBBXA8MT70 800 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 BTNL10A8MVZ5 291 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 MICAL2O94851 1124 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 LSM8O95777 96 aaKnown RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 FTLP02792 175 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 PDGFRBP09619 1106 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 TMEM253P0C7T8 217 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 ACAT1P24752 427 aaKnown RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 PBX3P40426 434 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 LHX1P48742 406 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 GALCP54803 685 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 BCAR1P56945 870 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 PSMC1P62191 440 aaKnown RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 SHHQ15465 462 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 CCDC142Q17RM4 750 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 ARHGAP29Q52LW3 1261 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 PPP1R26Q5T8A7 1209 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 KIAA0319Q5VV43 1072 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 ARHGAP17Q68EM7 881 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 ACAD10Q6JQN1 1059 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 DENND1BQ6P3S1 775 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 TMEM173Q86WV6 379 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 TXLNBQ8N3L3 684 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 C12orf29Q8N999 325 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 B3GALNT2Q8NCR0 500 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 C1orf131Q8NDD1 294 aaKnown RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 BCL7CQ8WUZ0 217 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 HERVK_113Q902F9 699 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 TNIP3Q96KP6 325 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 C16orf45Q96MC5 204 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
PABPC1-203ENST00000517921 LPIN3Q9BQK8 851 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 COLEC11Q9BWP8 271 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 PDCL3Q9H2J4 239 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 FAN1Q9Y2M0 1017 aa11.23□□□□□ -0.61
PABPC1-203ENST00000517921 ANKRD62A6NC57 917 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 NT5C1B-RDH14C9J2C7 533 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 M0QYV0 167 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 SYN3O14994 580 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 KRT86O43790 486 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 TADA2AO75478 443 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 SF3B1O75533 1304 aaKnown RBP eCLIP11.22□□□□□ -0.616e-6■■■■■ 43.4
PABPC1-203ENST00000517921 EFEMP2O95967 443 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 ALDH2P05091 517 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 CCDC130P13994 396 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 TKTP29401 623 aaKnown RBP11.22□□□□□ -0.61
PABPC1-203ENST00000517921 HTRA4P83105 476 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-203ENST00000517921 KIF5AQ12840 1032 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 STILQ15468 1287 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 CNGA2Q16280 664 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 GOLGA7BQ2TAP0 167 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 C9orf50Q5SZB4 431 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 FUT10Q6P4F1 479 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 LCLAT1Q6UWP7 414 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 MON1BQ7L1V2 547 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 METTL23Q86XA0 190 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 PHF13Q86YI8 300 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-203ENST00000517921 TMEM35BQ8NCS4 154 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 CPA5Q8WXQ8 436 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 ARHGEF26Q96DR7 871 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 GPR62Q9BZJ7 368 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 DNAI2Q9GZS0 605 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 LHX5Q9H2C1 402 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 CRTAC1Q9NQ79 661 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 RRAGDQ9NQL2 400 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-203ENST00000517921 FAM49BQ9NUQ9 324 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 CHD7Q9P2D1 2997 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 SALL4Q9UJQ4 1053 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 TSPAN16Q9UKR8 245 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 CDH9Q9ULB4 789 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 CEP83Q9Y592 693 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 MRPL42Q9Y6G3 142 aaKnown RBP11.22□□□□□ -0.61
PABPC1-203ENST00000517921 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
PABPC1-203ENST00000517921 MYO7AQ13402 2215 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 DENND4CQ5VZ89 1909 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 CHD9Q3L8U1 2897 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 A0A0A6YYK5 440 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-203ENST00000517921 TRAPPC3O43617 180 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 ATP2C2O75185 946 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 GJB5O95377 273 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 PTPN1P18031 435 aaKnown RBP11.21□□□□□ -0.61
PABPC1-203ENST00000517921 LAG3P18627 525 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 ABCB4P21439 1286 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 FGFR3P22607 806 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 PCSK1P29120 753 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 GPD2P43304 727 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 NSFP46459 744 aaKnown RBP11.21□□□□□ -0.61
PABPC1-203ENST00000517921 PTP4A2Q12974 167 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 BTG3Q14201 252 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-203ENST00000517921 INTS6LQ5JSJ4 861 aaKnown RBP11.21□□□□□ -0.61
PABPC1-203ENST00000517921 OVOS1Q6IE37 1185 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 PPP1R2P3Q6NXS1 205 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 Q7L0L9 218 aa11.21□□□□□ -0.61
PABPC1-203ENST00000517921 TTC30AQ86WT1 665 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms