RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 FAM47CQ5HY64 1035 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 PDZD4Q76G19 769 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 GALNT15Q8N3T1 639 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 ZNF384Q8TF68 577 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 SHC3Q92529 594 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 GMCL1Q96IK5 515 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 PI4K2AQ9BTU6 479 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 DENND2DQ9H6A0 471 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 ANKEF1Q9NU02 776 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 KCNK4Q9NYG8 393 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 PAK5Q9P286 719 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 WDR35Q9P2L0 1181 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 COMMD3-BMI1R4GMX3 469 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 CCDC85CA6NKD9 419 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 ANKRD63C9JTQ0 380 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 SNHG28P0DPA3 235 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 STIP1P31948 543 aaKnown RBP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 HSPA13P48723 471 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 ADRM1Q16186 407 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 SPRED3Q2MJR0 410 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 ZNF394Q53GI3 561 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 LMBRD2Q68DH5 695 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 OR6B2Q6IFH4 312 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 ACAD11Q709F0 780 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 CLNKQ7Z7G1 428 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 SLC26A11Q86WA9 606 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 LDHDQ86WU2 507 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 CDKL3Q8IVW4 592 aaPredicted RBP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 DDI1Q8WTU0 396 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 SLCO2A1Q92959 643 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 C17orf75Q9HAS0 396 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
CPNE3-203ENST00000517490 DTNAQ9Y4J8 743 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 LRRC42Q9Y546 428 aa6.97□□□□□ -1.29
CPNE3-203ENST00000517490 TCRBV7S2A1N4TA0A589 114 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 EXTL3O43909 919 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 SSTR3P32745 418 aaPredicted RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 SHMT1P34896 483 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 PPM1FP49593 454 aaPredicted RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 CUL2Q13617 745 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 TFDP1Q14186 410 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 SGSM1Q2NKQ1 1148 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 GALNTL6Q49A17 601 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 SCARA5Q6ZMJ2 495 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 PODNQ7Z5L7 613 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 TDRPQ86YL5 185 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 SP8Q8IXZ3 490 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 THNSL1Q8IYQ7 743 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 GMCL1P1Q8NEA9 526 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 PPWD1Q96BP3 646 aaKnown RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 MAML3Q96JK9 1138 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 TXLNGYQ9BZA5 131 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 DBNDD1Q9H9R9 158 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 PCMTD2Q9NV79 361 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 STX18Q9P2W9 335 aaKnown RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 HESX1Q9UBX0 185 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 GRID1Q9ULK0 1009 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 DRG1Q9Y295 367 aaKnown RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 ZBTB12Q9Y330 459 aaPredicted RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 LAMB4A4D0S4 1761 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 KCNQ2O43526 872 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 GPC4O75487 556 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 RBP3P10745 1247 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 TSHRP16473 764 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 CLK2P49760 499 aaKnown RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 SLC12A2P55011 1212 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 AQP5P55064 265 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 BCAR1P56945 870 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 POU5F1Q01860 360 aaKnown RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 SLC35G1Q2M3R5 365 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 TEDDM1Q5T9Z0 273 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 NDUFAF2Q8N183 169 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 KAT5Q92993 513 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 SIKE1Q9BRV8 207 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 POLR3FQ9H1D9 316 aaPredicted RBP6.96□□□□□ -1.29
CPNE3-203ENST00000517490 RSAD1Q9HA92 442 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 RAB6BQ9NRW1 208 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 TLK1Q9UKI8 766 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 CHKBQ9Y259 395 aa6.96□□□□□ -1.29
CPNE3-203ENST00000517490 NOP56O00567 594 aaKnown RBP6.96□□□□□ -1.3
CPNE3-203ENST00000517490 MEIS2O14770 477 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 ALOX15BO15296 676 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 GSC2O15499 205 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 ADCY3O60266 1144 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 PEX11AO75192 247 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 CREB1P16220 341 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 GPC3P51654 580 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 DLG4P78352 724 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 OCRLQ01968 901 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 SPDYAQ5MJ70 313 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 OLFML2BQ68BL8 750 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 C16orf89Q6UX73 402 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 SV2AQ7L0J3 742 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 FAM81AQ8TBF8 368 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 PCDHB18PQ96TA0 734 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 TMEM121Q9BTD3 319 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 SSU72Q9NP77 194 aaKnown RBP6.96□□□□□ -1.3
CPNE3-203ENST00000517490 DNPEPQ9ULA0 475 aa6.96□□□□□ -1.3
CPNE3-203ENST00000517490 SOX13Q9UN79 622 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms