RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 GJD3Q8N144 294 aa27.72■■■□□ 2.03
DDR1-279ENST00000515529 TDRD5Q8NAT2 981 aaKnown RBP27.72■■■□□ 2.03
DDR1-279ENST00000515529 ACSF2Q96CM8 615 aaPredicted RBP27.72■■■□□ 2.03
DDR1-279ENST00000515529 TNIP3Q96KP6 325 aa27.72■■■□□ 2.03
DDR1-279ENST00000515529 APOBEC3GQ9HC16 384 aaKnown RBP27.72■■■□□ 2.03
DDR1-279ENST00000515529 TMLHEQ9NVH6 421 aa27.72■■■□□ 2.03
DDR1-279ENST00000515529 COQ4Q9Y3A0 265 aa27.72■■■□□ 2.03
DDR1-279ENST00000515529 P4HA2O15460 535 aa27.71■■■□□ 2.03
DDR1-279ENST00000515529 ASPAP45381 313 aa27.71■■■□□ 2.03
DDR1-279ENST00000515529 VEPH1Q14D04 833 aa27.71■■■□□ 2.03
DDR1-279ENST00000515529 PABPC1LQ4VXU2 614 aaKnown RBP27.71■■■□□ 2.03
DDR1-279ENST00000515529 TTC9BQ8N6N2 239 aa27.71■■■□□ 2.03
DDR1-279ENST00000515529 CORO1BQ9BR76 489 aa27.71■■■□□ 2.03
DDR1-279ENST00000515529 COL25A1Q9BXS0 654 aaPredicted RBP27.71■■■□□ 2.03
DDR1-279ENST00000515529 CRISPLD1Q9H336 500 aa27.71■■■□□ 2.03
DDR1-279ENST00000515529 ABCB6Q9NP58 842 aa27.71■■■□□ 2.03
DDR1-279ENST00000515529 MYBPHLA2RUH7 354 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 ATP2C2O75185 946 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 HAPLN1P10915 354 aaPredicted RBP27.7■■■□□ 2.02
DDR1-279ENST00000515529 PTPN1P18031 435 aaKnown RBP27.7■■■□□ 2.02
DDR1-279ENST00000515529 FSHRP23945 695 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 GBP2P32456 591 aaPredicted RBP27.7■■■□□ 2.02
DDR1-279ENST00000515529 CYP27A1Q02318 531 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 TAF12Q16514 161 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 MDH1BQ5I0G3 518 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 GET4Q7L5D6 327 aaPredicted RBP27.7■■■□□ 2.02
DDR1-279ENST00000515529 ITIH5Q86UX2 942 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 FUBP3Q96I24 572 aaKnown RBP eCLIP27.7■■■□□ 2.02
DDR1-279ENST00000515529 FAXDC2Q96IV6 333 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 BCO2Q9BYV7 579 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 SDCBP2Q9H190 292 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 CRTAC1Q9NQ79 661 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 HCFC1R1Q9NWW0 138 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 DNMT3BQ9UBC3 853 aaKnown RBP27.7■■■□□ 2.02
DDR1-279ENST00000515529 USTQ9Y2C2 406 aa27.7■■■□□ 2.02
DDR1-279ENST00000515529 PMM2O15305 246 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 SOAT2O75908 522 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 LETM1O95202 739 aaPredicted RBP27.69■■■□□ 2.02
DDR1-279ENST00000515529 NTHL1P78549 312 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 TYRO3Q06418 890 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 CYP4A22Q5TCH4 519 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 FAM171BQ6P995 826 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 UNC93AQ86WB7 457 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 B3GALNT2Q8NCR0 500 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 MYCBPAPQ8TBZ2 947 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 MYLPFQ96A32 169 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 PKMYT1Q99640 499 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 ASAH2Q9NR71 780 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 ASB3Q9Y575 518 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 C2orf16Q68DN1 1984 aa27.69■■■□□ 2.02
DDR1-279ENST00000515529 LOC730098B7Z3J9 87 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 LRRN2O75325 713 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 RHOP08100 348 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 CD58P19256 250 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 NDST1P52848 882 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 RPL10AP62906 217 aaKnown RBP27.68■■■□□ 2.02
DDR1-279ENST00000515529 SKOR2Q2VWA4 1001 aaPredicted RBP27.68■■■□□ 2.02
DDR1-279ENST00000515529 PDZD4Q76G19 769 aaPredicted RBP27.68■■■□□ 2.02
DDR1-279ENST00000515529 PLCD3Q8N3E9 789 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 TTC39CQ8N584 583 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 ENOX1Q8TC92 643 aaKnown RBP27.68■■■□□ 2.02
DDR1-279ENST00000515529 NAT10Q9H0A0 1025 aaKnown RBP27.68■■■□□ 2.02
DDR1-279ENST00000515529 DPEP3Q9H4B8 488 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.68■■■□□ 2.029e-7■■■■□ 21.1
DDR1-279ENST00000515529 CEP72Q9P209 647 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 NFE2L3Q9Y4A8 694 aa27.68■■■□□ 2.02
DDR1-279ENST00000515529 ATP8B3O60423 1300 aa27.67■■■□□ 2.02
DDR1-279ENST00000515529 C19orf67A6NJJ6 358 aa27.67■■■□□ 2.02
DDR1-279ENST00000515529 CYP2F1P24903 491 aa27.67■■■□□ 2.02
DDR1-279ENST00000515529 CFAP221Q4G0U5 840 aa27.67■■■□□ 2.02
DDR1-279ENST00000515529 HSP90AA4PQ58FG1 418 aa27.67■■■□□ 2.02
DDR1-279ENST00000515529 C11orf57Q6ZUT1 292 aaPredicted RBP27.67■■■□□ 2.02
DDR1-279ENST00000515529 LEMD2Q8NC56 503 aa27.67■■■□□ 2.02
DDR1-279ENST00000515529 NT5C1BQ96P26 610 aa27.67■■■□□ 2.02
DDR1-279ENST00000515529 MRPS23Q9Y3D9 190 aaKnown RBP27.67■■■□□ 2.02
DDR1-279ENST00000515529 C2CD4DB7Z1M9 353 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 ZNF197O14709 1029 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 YWHAEP62258 255 aaKnown RBP27.66■■■□□ 2.02
DDR1-279ENST00000515529 LRMPQ12912 555 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 CCDC142Q17RM4 750 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 ACOT1Q86TX2 421 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 IRF2BP1Q8IU81 584 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 SCN4BQ8IWT1 228 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 TATDN2Q93075 761 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 PCED1BQ96HM7 432 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 MED10Q9BTT4 135 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 NT5C1AQ9BXI3 368 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 DNAJC25Q9H1X3 360 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 NME7Q9Y5B8 376 aa27.66■■■□□ 2.02
DDR1-279ENST00000515529 MYL4P12829 197 aa27.65■■■□□ 2.02
DDR1-279ENST00000515529 PRKCSHP14314 528 aaPredicted RBP27.65■■■□□ 2.02
DDR1-279ENST00000515529 TBXAS1P24557 533 aaPredicted RBP27.65■■■□□ 2.02
DDR1-279ENST00000515529 INCA1Q0VD86 236 aa27.65■■■□□ 2.02
DDR1-279ENST00000515529 MAN2A1Q16706 1144 aa27.65■■■□□ 2.02
DDR1-279ENST00000515529 GIPC2Q8TF65 315 aa27.65■■■□□ 2.02
DDR1-279ENST00000515529 LPIN3Q9BQK8 851 aa27.65■■■□□ 2.02
DDR1-279ENST00000515529 KCNJ18B7U540 433 aa27.64■■■□□ 2.02
DDR1-279ENST00000515529 PES1O00541 588 aaKnown RBP27.64■■■□□ 2.02
DDR1-279ENST00000515529 BDNFP23560 247 aa27.64■■■□□ 2.02
DDR1-279ENST00000515529 ANXA13P27216 316 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms