RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 PDPRQ8NCN5 879 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 FAM46DQ8NEK8 389 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 SHCBP1Q8NEM2 672 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 DACT3Q96B18 629 aaPredicted RBP6.02□□□□□ -1.45
RFC1-216ENST00000514572 LCORQ96JN0 433 aaPredicted RBP6.02□□□□□ -1.45
RFC1-216ENST00000514572 PPP1R9BQ96SB3 815 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 TCF25Q9BQ70 676 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 CNPPD1Q9BV87 410 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 PCDHAC1Q9H158 963 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 MLXIPQ9HAP2 919 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 GOLGA2P5Q9HBQ8 144 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 WASH6PQ9NQA3 447 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 PRDM8Q9NQV8 689 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 HDAC9Q9UKV0 1011 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 CA14Q9ULX7 337 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 TBC1D30Q9Y2I9 924 aa6.02□□□□□ -1.45
RFC1-216ENST00000514572 SMARCA2P51531 1590 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 A0A1B0GTL3 188 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 TRIM13O60858 407 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 XRCC6P12956 609 aaKnown RBP eCLIP6.01□□□□□ -1.45
RFC1-216ENST00000514572 IDEP14735 1019 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 ADD2P35612 726 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 ARHGEF7Q14155 803 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 FAM110CQ1W6H9 321 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 ATXN7L2Q5T6C5 722 aaPredicted RBP6.01□□□□□ -1.45
RFC1-216ENST00000514572 MRNIPQ6NTE8 343 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 RETSATQ6NUM9 610 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 XYLT1Q86Y38 959 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 GATAD2AQ86YP4 633 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 CPOQ8IVL8 374 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 KBTBD2Q8IY47 623 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 FITM2Q8N6M3 262 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 CCDC150Q8NCX0 1101 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 ZFP28Q8NHY6 868 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 THAP4Q8WY91 577 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 RAPGEF4Q8WZA2 1011 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 KCNN1Q92952 543 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 RILPL2Q969X0 211 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 ZNF512Q96ME7 567 aaPredicted RBP6.01□□□□□ -1.45
RFC1-216ENST00000514572 FMNL2Q96PY5 1086 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 PABPC3Q9H361 631 aaKnown RBP6.01□□□□□ -1.45
RFC1-216ENST00000514572 TP63Q9H3D4 680 aaPredicted RBP6.01□□□□□ -1.45
RFC1-216ENST00000514572 RASSF1Q9NS23 344 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 DNMT3BQ9UBC3 853 aaKnown RBP6.01□□□□□ -1.45
RFC1-216ENST00000514572 HERC5Q9UII4 1024 aaKnown RBP6.01□□□□□ -1.45
RFC1-216ENST00000514572 ZMYND8Q9ULU4 1186 aaPredicted RBP6.01□□□□□ -1.45
RFC1-216ENST00000514572 ATP11BQ9Y2G3 1177 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 MTO1Q9Y2Z2 717 aaKnown RBP6.01□□□□□ -1.45
RFC1-216ENST00000514572 ZDHHC9Q9Y397 364 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 HS3ST4Q9Y661 456 aa6.01□□□□□ -1.45
RFC1-216ENST00000514572 HMGXB3Q12766 1538 aa6□□□□□ -1.45
RFC1-216ENST00000514572 H7C4K7 107 aa6□□□□□ -1.45
RFC1-216ENST00000514572 RAB27BO00194 218 aa6□□□□□ -1.45
RFC1-216ENST00000514572 DHHO43323 396 aa6□□□□□ -1.45
RFC1-216ENST00000514572 RRP9O43818 475 aaKnown RBP6□□□□□ -1.45
RFC1-216ENST00000514572 B4GALT3O60512 393 aa6□□□□□ -1.45
RFC1-216ENST00000514572 PRSS23O95084 383 aa6□□□□□ -1.45
RFC1-216ENST00000514572 ITGA2BP08514 1039 aa6□□□□□ -1.45
RFC1-216ENST00000514572 PECAM1P16284 738 aaPredicted RBP6□□□□□ -1.45
RFC1-216ENST00000514572 POLE2P56282 527 aa6□□□□□ -1.45
RFC1-216ENST00000514572 NSUN2Q08J23 767 aaKnown RBP eCLIP6□□□□□ -1.45
RFC1-216ENST00000514572 CNGB1Q14028 1251 aaPredicted RBP6□□□□□ -1.45
RFC1-216ENST00000514572 TAF12Q16514 161 aa6□□□□□ -1.45
RFC1-216ENST00000514572 TIGD6Q17RP2 521 aa6□□□□□ -1.45
RFC1-216ENST00000514572 AMOTQ4VCS5 1084 aa6□□□□□ -1.45
RFC1-216ENST00000514572 PLA1AQ53H76 456 aa6□□□□□ -1.45
RFC1-216ENST00000514572 EEF1AKMT2Q5JPI9 291 aaKnown RBP6□□□□□ -1.45
RFC1-216ENST00000514572 METTL24Q5JXM2 366 aa6□□□□□ -1.45
RFC1-216ENST00000514572 MAATS1Q7Z4T9 603 aa6□□□□□ -1.45
RFC1-216ENST00000514572 TP53I13Q8NBR0 393 aaPredicted RBP6□□□□□ -1.45
RFC1-216ENST00000514572 SLC17A8Q8NDX2 589 aa6□□□□□ -1.45
RFC1-216ENST00000514572 OR52N2Q8NGI0 321 aa6□□□□□ -1.45
RFC1-216ENST00000514572 RSC1A1Q92681 617 aa6□□□□□ -1.45
RFC1-216ENST00000514572 TFAP2CQ92754 450 aa6□□□□□ -1.45
RFC1-216ENST00000514572 PRPF18Q99633 342 aaKnown RBP6□□□□□ -1.45
RFC1-216ENST00000514572 PYM1Q9BRP8 204 aaKnown RBP6□□□□□ -1.45
RFC1-216ENST00000514572 FAM167BQ9BTA0 163 aa6□□□□□ -1.45
RFC1-216ENST00000514572 TLR10Q9BXR5 811 aa6□□□□□ -1.45
RFC1-216ENST00000514572 UNC45AQ9H3U1 944 aa6□□□□□ -1.45
RFC1-216ENST00000514572 FAM83DQ9H4H8 585 aa6□□□□□ -1.45
RFC1-216ENST00000514572 SAYSD1Q9NPB0 183 aa6□□□□□ -1.45
RFC1-216ENST00000514572 VPS45Q9NRW7 570 aa6□□□□□ -1.45
RFC1-216ENST00000514572 VSX1Q9NZR4 365 aaPredicted RBP6□□□□□ -1.45
RFC1-216ENST00000514572 LPAR3Q9UBY5 353 aa6□□□□□ -1.45
RFC1-216ENST00000514572 FEM1BQ9UK73 627 aa6□□□□□ -1.45
RFC1-216ENST00000514572 OAZ3Q9UMX2 235 aa6□□□□□ -1.45
RFC1-216ENST00000514572 ATAD2BQ9ULI0 1458 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 A0A1W2PRX2 142 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 NTSR2O95665 410 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 FCER1AP12319 257 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 GCSHP23434 173 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 TXKP42681 527 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 PTDSS1P48651 473 aaKnown RBP5.99□□□□□ -1.45
RFC1-216ENST00000514572 SEC24CP53992 1094 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 MESP2Q0VG99 397 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 ZNF750Q32MQ0 723 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 ZIK1Q3SY52 487 aaPredicted RBP5.99□□□□□ -1.45
RFC1-216ENST00000514572 ZNF568Q3ZCX4 644 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 NOMO2Q5JPE7 1267 aa5.99□□□□□ -1.45
RFC1-216ENST00000514572 FAM111BQ6SJ93 734 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms