RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 MED16Q9Y2X0 877 aa4.1□□□□□ -1.75
CALCOCO2-223ENST00000514267 USP15Q9Y4E8 981 aaPredicted RBP4.1□□□□□ -1.75
CALCOCO2-223ENST00000514267 USP19O94966 1318 aa4.1□□□□□ -1.75
CALCOCO2-223ENST00000514267 TRIM43BA6NCK2 446 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 ZAR1LA6NP61 321 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 F2RL2O00254 374 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 LEFTY2O00292 366 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 APOL1O14791 398 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 HNRNPDLO14979 420 aaKnown RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 FFAR2O15552 330 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 ORC4O43929 436 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 KRT4P19013 534 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 FDXRP22570 491 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 GCSHP23434 173 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 ADRA1BP35368 520 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 CHKAP35790 457 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 ZEB1P37275 1124 aaPredicted RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 PIK3CGP48736 1102 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 HSPA7P48741 367 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 CHN2P52757 468 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 MAPK10P53779 464 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 SUMO3P55854 103 aaPredicted RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 NANOS3P60323 173 aaKnown RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 FSTL1Q12841 308 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 PUM3Q15397 648 aaKnown RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 ARL13BQ3SXY8 428 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 TUBB8Q3ZCM7 444 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 PDCD4Q53EL6 469 aaKnown RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 AFMIDQ63HM1 303 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 CCDC174Q6PII3 467 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 LDHAL6AQ6ZMR3 332 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 Q6ZPA2 131 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 BEND5Q7L4P6 421 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 PPP1R3BQ86XI6 285 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 SYT12Q8IV01 421 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 SDR16C5Q8N3Y7 309 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 ZGPATQ8N5A5 531 aaKnown RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 CCDC33Q8N5R6 958 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 AOPEPQ8N6M6 819 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 TEX19Q8NA77 164 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 ATP11CQ8NB49 1132 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 RNF169Q8NCN4 708 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 OR56A1Q8NGH5 318 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 OR6B3Q8NGW1 331 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 NUP133Q8WUM0 1156 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 LINC00476Q8WZB0 136 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 FUBP1Q96AE4 644 aaKnown RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 TRIM43Q96BQ3 446 aaPredicted RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 BOD1Q96IK1 185 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 TBATAQ96M53 351 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 TMEM74BQ9NUR3 256 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 TBCCD1Q9NVR7 557 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 RLIMQ9NVW2 624 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 MYO1AQ9UBC5 1043 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 DKK2Q9UBU2 259 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 CDC23Q9UJX2 597 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 AJAP1Q9UKB5 411 aaPredicted RBP4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 PCDHA6Q9UN73 950 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 PCDHA1Q9Y5I3 950 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 ATRNL1Q5VV63 1379 aa4.09□□□□□ -1.75
CALCOCO2-223ENST00000514267 MYADML2A6NDP7 307 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 GOLGA6L3A6NEY3 463 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 CLCA1A8K7I4 914 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 THAP12O43422 761 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 PLA2G6O60733 806 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 SKAP2O75563 359 aaPredicted RBP4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 CSTBP04080 98 aaKnown RBP4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 MTHFD1P11586 935 aaKnown RBP4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 FBLP22087 321 aaKnown RBP4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 RAP2BP61225 183 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 HTRA4P83105 476 aaPredicted RBP4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 PPFIA1Q13136 1202 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 MPP3Q13368 585 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 PMS2P11Q13670 270 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 HABP2Q14520 560 aaPredicted RBP4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 STARD3Q14849 445 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 UBXN2BQ14CS0 331 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 MPEG1Q2M385 716 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 PABPC1LQ4VXU2 614 aaKnown RBP4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 CCDC38Q502W7 563 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 SLC44A4Q53GD3 710 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 ANKS6Q68DC2 871 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 Q6YL49 198 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 ZNF783Q6ZMS7 281 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 MED25Q71SY5 747 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 PRIMA1Q86XR5 153 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 MAPKAPK5Q8IW41 473 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 FITM2Q8N6M3 262 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 ZNF527Q8NB42 609 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 FANCBQ8NB91 859 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 IL17RDQ8NFM7 739 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 CYP2W1Q8TAV3 490 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 RAB24Q969Q5 203 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 GCC1Q96CN9 775 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 IQCDQ96DY2 449 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 LTV1Q96GA3 475 aaPredicted RBP4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 PNKPQ96T60 521 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 SENP7Q9BQF6 1050 aa4.08□□□□□ -1.76
CALCOCO2-223ENST00000514267 STK33Q9BYT3 514 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms