RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 CUL3Q13618 768 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 VGLL4Q14135 290 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 TARBP2Q15633 366 aaKnown RBP13.24□□□□□ -0.29
SDHA-216ENST00000514027 ZNF568Q3ZCX4 644 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 CYP4A22Q5TCH4 519 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 CYP4F22Q6NT55 531 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 WDR49Q8IV35 697 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 EXOC8Q8IYI6 725 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.24□□□□□ -0.298e-20■■■□□ 17.8
SDHA-216ENST00000514027 SERPINB12Q96P63 405 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 SLC12A4Q9UP95 1085 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 ZNF148Q9UQR1 794 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 SOWAHBA6NEL2 793 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 F8VP50 259 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 PDLIM1O00151 329 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 TOM1L1O75674 476 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 ASS1P00966 412 aaKnown RBP13.24□□□□□ -0.29
SDHA-216ENST00000514027 PRKCBP05771 671 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 MMP8P22894 467 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 TNFAIP8L3Q5GJ75 292 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 GPAT2Q6NUI2 795 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 LBX2Q6XYB7 198 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 PNMA8AQ86V59 439 aaPredicted RBP13.24□□□□□ -0.29
SDHA-216ENST00000514027 CDR2LQ86X02 465 aaPredicted RBP13.24□□□□□ -0.29
SDHA-216ENST00000514027 THNSL1Q8IYQ7 743 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 GDAP1Q8TB36 358 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 FAM167BQ9BTA0 163 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 CISHQ9NSE2 258 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 DNPEPQ9ULA0 475 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 CNTN6Q9UQ52 1028 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 IVNS1ABPQ9Y6Y0 642 aa13.24□□□□□ -0.29
SDHA-216ENST00000514027 MSCO60682 206 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 CALB1P05937 261 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 GSTA1P08263 222 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 ZSCAN5DPP0CG00 497 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 TPP2P29144 1249 aaPredicted RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 ZNF252P-AS1Q0IIN9 211 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 LAMTOR4Q0VGL1 99 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 NOL9Q5SY16 702 aaKnown RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 PPP1R2P3Q6NXS1 205 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 ZPBP2Q6X784 338 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 ZBTB8OSQ8IWT0 167 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 TEX9Q8N6V9 391 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 SEPT1Q8WYJ6 367 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 SLITRK1Q96PX8 696 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 NIF3L1Q9GZT8 377 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 NSRP1Q9H0G5 558 aaKnown RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 DPPA5A6NC42 116 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 CFAP73A6NFT4 308 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 NOP56O00567 594 aaKnown RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 GJB1P08034 283 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 ETS1P14921 441 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 ZNF132P52740 706 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 EFNA5P52803 228 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 MAPK6Q16659 721 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 HP1BP3Q5SSJ5 553 aaPredicted RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 GLIS1Q8NBF1 620 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 TMEM35BQ8NCS4 154 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 BBOF1Q8ND07 529 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 TEKT4Q8WW24 435 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 NLRP4Q96MN2 994 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 RBM15Q96T37 977 aaKnown RBP eCLIP13.23□□□□□ -0.29
SDHA-216ENST00000514027 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 SPATC1LQ9H0A9 340 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 ZCWPW1Q9H0M4 648 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 NXF1Q9UBU9 619 aaKnown RBP13.23□□□□□ -0.29
SDHA-216ENST00000514027 NEU2Q9Y3R4 380 aa13.23□□□□□ -0.29
SDHA-216ENST00000514027 LRRD1A4D1F6 860 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 GOLGA8SH3BPF8 625 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 OGTO15294 1046 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 ASAP2O43150 1006 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 MAP3K13O43283 966 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 LIASO43766 372 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 FAM189A1O60320 539 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 USP2O75604 605 aaPredicted RBP13.22□□□□□ -0.29
SDHA-216ENST00000514027 TJP3O95049 919 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 ARIH2O95376 493 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 NPTXRO95502 500 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 PGK2P07205 417 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 KRT19P08727 400 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 BRAFP15056 766 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 HIRAP54198 1017 aaPredicted RBP13.22□□□□□ -0.29
SDHA-216ENST00000514027 PLCB3Q01970 1234 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 OGDHQ02218 1023 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
SDHA-216ENST00000514027 DUOXA2Q1HG44 320 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 ANKRD20A2Q5SQ80 823 aa13.22□□□□□ -0.29
SDHA-216ENST00000514027 ANKRD20A1Q5TYW2 823 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms