RNA–Protein interactions for RNA: ENST00000512286.1

SEL1L3-208, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 739 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-208ENST00000512286 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
SEL1L3-208ENST00000512286 ABI2Q9NYB9 513 aaPredicted RBP12.88□□□□□ -0.35
SEL1L3-208ENST00000512286 HSPBP1Q9NZL4 362 aa12.88□□□□□ -0.35
SEL1L3-208ENST00000512286 L1RE1Q9UN81 338 aa12.88□□□□□ -0.35
SEL1L3-208ENST00000512286 COL4A3Q01955 1670 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 VPS13AQ96RL7 3174 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 PVALEFA0A1B0GWK0 134 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 DPYSL4O14531 572 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 LRRN2O75325 713 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 PRPF40AO75400 957 aaKnown RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 SOAT2O75908 522 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 LMNAP02545 664 aaKnown RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 CSH1P0DML2 217 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 CSH2P0DML3 217 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 CD72P21854 359 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 EHHADHQ08426 723 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 ARHGAP29Q52LW3 1261 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 INTS6LQ5JSJ4 861 aaKnown RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 GPR158Q5T848 1215 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 FOXD4L5Q5VV16 416 aaPredicted RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 LRRTM3Q86VH5 581 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 ARID3BQ8IVW6 561 aaPredicted RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 CSGALNACT1Q8TDX6 532 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 FOXD4L4Q8WXT5 416 aaPredicted RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 FUBP3Q96I24 572 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 MKNK1Q9BUB5 465 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 TASP1Q9H6P5 420 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 C8orf33Q9H7E9 229 aaPredicted RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 UXTQ9UBK9 157 aaPredicted RBP12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 PCDHA7Q9UN72 937 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 SNX9Q9Y5X1 595 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 PIAS3Q9Y6X2 628 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 DENND4CQ5VZ89 1909 aa12.87□□□□□ -0.35
SEL1L3-208ENST00000512286 ARNTLO00327 626 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 GABRDO14764 452 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 HOXD13P35453 343 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 PPP2R5DQ14738 602 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 SNRNP35Q16560 246 aaKnown RBP12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 BMT2Q1RMZ1 405 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 CFAP221Q4G0U5 840 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 STXBP5Q5T5C0 1151 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 CBWD2Q8IUF1 395 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 CEP57L1Q8IYX8 460 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 ADGRF2Q8IZF7 708 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 GLIS3Q8NEA6 775 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 HPS3Q969F9 1004 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 HPDLQ96IR7 371 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 FAM126AQ9BYI3 521 aaPredicted RBP12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 IL21Q9HBE4 155 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 RCOR1Q9UKL0 485 aa12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 MTF2Q9Y483 593 aaPredicted RBP12.86□□□□□ -0.35
SEL1L3-208ENST00000512286 OBSL1O75147 1896 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 SHISA7A6NL88 538 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 TGFB1I1O43294 461 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 MYL1P05976 194 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 MAPRE1Q15691 268 aaKnown RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 MAML2Q8IZL2 1156 aaPredicted RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 CELF5Q8N6W0 485 aaKnown RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 BPIFB1Q8TDL5 484 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 SCFD1Q8WVM8 642 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 FAM3CQ92520 227 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 MRPS31Q92665 395 aaKnown RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 TRMT2BQ96GJ1 504 aaKnown RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 CEP295NLQ96MC4 621 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 CHRDQ9H2X0 955 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 KIF9Q9HAQ2 790 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 THG1LQ9NWX6 298 aaKnown RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 NDRG2Q9UN36 371 aaKnown RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 R4GN57 208 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 NCANO14594 1321 aa12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 KIF26AQ9ULI4 1882 aaPredicted RBP12.85□□□□□ -0.35
SEL1L3-208ENST00000512286 EP300Q09472 2414 aaPredicted RBP12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 ZNF292O60281 2723 aa12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 CFAP54Q96N23 3096 aa12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 SLFN14P0C7P3 912 aa12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 TNNI1P19237 187 aa12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 AVPR1AP37288 418 aa12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 MAGEA11P43364 429 aa12.84□□□□□ -0.35
SEL1L3-208ENST00000512286 KPNA1P52294 538 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms