RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 GLI1P08151 1106 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 FKBP1BP68106 108 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 SHCBP1Q8NEM2 672 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 HDAC11Q96DB2 347 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 MTG1Q9BT17 334 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 KIF9Q9HAQ2 790 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 SP110Q9HB58 689 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 BCAP29Q9UHQ4 241 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 SMAPO00193 183 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 EEF2KO00418 725 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 AKAP5P24588 427 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 PSEN2P49810 448 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 NDST1P52848 882 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 MTM1Q13496 603 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 LONRF1Q17RB8 773 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 IRF2BP2Q7Z5L9 587 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 RAB44Q7Z6P3 723 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 NT5DC4Q86YG4 428 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 DCLK2Q8N568 766 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 GBP7Q8N8V2 638 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 CHMP6Q96FZ7 201 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 TRIM55Q9BYV6 548 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 FAM129AQ9BZQ8 928 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 PABPC3Q9H361 631 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 TJP2Q9UDY2 1190 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 XPO7Q9UIA9 1087 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 DFFAO00273 331 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 EIF4BP23588 611 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 YY1P25490 414 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 HSD17B3P37058 310 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 PDK1Q15118 436 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 FSCN1Q16658 493 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 FAM71AQ8IYT1 594 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 ADGRF2Q8IZF7 708 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 C12orf42Q96LP6 360 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 MAGEB5Q9BZ81 275 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 HSD3B7Q9H2F3 369 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 AVENQ9NQS1 362 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 ZC3H7BQ9UGR2 993 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 ZNF214Q9UL59 606 aaPredicted RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 TNFSF13BQ9Y275 285 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 ANKRD65E5RJM6 399 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 ATP9BO43861 1147 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 ODC1P11926 461 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 KCNA2P16389 499 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 MDH1P40925 334 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 PAN2Q504Q3 1202 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 NLRP14Q86W24 1093 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 TMEM139Q8IV31 216 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 WDR75Q8IWA0 830 aaKnown RBP13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 FAM71DQ8N9W8 422 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 RXFP2Q8WXD0 754 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 DDIT4Q9NX09 232 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 ZFATQ9P243 1243 aa13.72□□□□□ -0.21
PCDHA4-202ENST00000512229 SLC15A5A6NIM6 579 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 M0QYT0 321 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 JAG1P78504 1218 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 ZCWPW2Q504Y3 356 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 JADE1Q6IE81 842 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 ZNF662Q6ZS27 426 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 GPR142Q7Z601 462 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 CRLF3Q8IUI8 442 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 CFAP61Q8NHU2 1237 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 IFT43Q96FT9 208 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 SLC13A1Q9BZW2 595 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 ROPN1BQ9BZX4 212 aaPredicted RBP13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 ROPN1Q9HAT0 212 aaPredicted RBP13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 NRCAMQ92823 1304 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 C5P01031 1676 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 PTENP60484 403 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 C3orf62Q6ZUJ4 267 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 PDCD6IPQ8WUM4 868 aaKnown RBP13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 TRABDQ9H4I3 376 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 TSPAN16Q9UKR8 245 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 RAB21Q9UL25 225 aa13.71□□□□□ -0.21
PCDHA4-202ENST00000512229 TYK2P29597 1187 aa13.71□□□□□ -0.22
PCDHA4-202ENST00000512229 PLA2G4AP47712 749 aa13.71□□□□□ -0.22
PCDHA4-202ENST00000512229 TSNAXIP1Q2TAA8 658 aa13.71□□□□□ -0.22
PCDHA4-202ENST00000512229 KLC3Q6P597 504 aa13.71□□□□□ -0.22
PCDHA4-202ENST00000512229 ARRDC4Q8NCT1 418 aa13.71□□□□□ -0.22
PCDHA4-202ENST00000512229 MAML1Q92585 1016 aa13.71□□□□□ -0.22
PCDHA4-202ENST00000512229 MAF1Q9H063 256 aa13.71□□□□□ -0.22
PCDHA4-202ENST00000512229 ACTR5Q9H9F9 607 aaPredicted RBP13.71□□□□□ -0.22
PCDHA4-202ENST00000512229 A0A0G2JND7 137 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 C3orf70A6NLC5 250 aaPredicted RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 CES2O00748 559 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 SPAG7O75391 227 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 HOXC6P09630 235 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 AXLP30530 894 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 HSPA9P38646 679 aaKnown RBP13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 CCNG2Q16589 344 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 MGAT5BQ3V5L5 792 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 PRAMEF19Q5SWL8 479 aa13.7□□□□□ -0.22
PCDHA4-202ENST00000512229 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms