RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZDHHC16Q969W1 377 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 NSUN4Q96CB9 384 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 AHCYL2Q96HN2 611 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 MAELQ96JY0 434 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 CCDC74BQ96LY2 380 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 SAMD11Q96NU1 681 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 GCOM2Q9BZD3 368 aaPredicted RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 TMEM39BQ9GZU3 492 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 C1orf21Q9H246 121 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 RPRD1BQ9NQG5 326 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 USP40Q9NVE5 1235 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 SLC13A4Q9UKG4 626 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 SRPK3Q9UPE1 567 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 CHTOPQ9Y3Y2 248 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 MYH13Q9UKX3 1938 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 GOLGA8AA7E2F4 631 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 GOLGA8BA8MQT2 603 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 EBAG9O00559 213 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 MAPK13O15264 365 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 ASGR1P07306 291 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 SLURP2P0DP57 97 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 ACTN1P12814 892 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 RARGP13631 454 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 VAV1P15498 845 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARL4CP56559 192 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 IL2P60568 153 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 AUHQ13825 339 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 LETM2Q2VYF4 491 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 C6orf132Q5T0Z8 1188 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 APOBEC3HQ6NTF7 200 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 GPR153Q6NV75 609 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZYG11AQ6WRX3 759 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 MOB2Q70IA6 237 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 BNIPLQ7Z465 357 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 THAP5Q7Z6K1 395 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 RNF10Q8N5U6 811 aaKnown RBP5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 OR52K1Q8NGK4 314 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 NPLOC4Q8TAT6 608 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 GPR152Q8TDT2 470 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 SH3RF3Q8TEJ3 882 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 PTP4A1Q93096 173 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 PACSIN1Q9BY11 444 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 DEFB129Q9H1M3 183 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 MMADHCQ9H3L0 296 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 TM9SF3Q9HD45 589 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 ANO10Q9NW15 660 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 C14orf119Q9NWQ9 140 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 WDR90Q96KV7 1748 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARAP2Q8WZ64 1704 aa5.33□□□□□ -1.56
TRAPPC11-208ENST00000511955 MYO1CO00159 1063 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 NPC1O15118 1278 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 NOL3O60936 208 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 GADD45BO75293 160 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 CELF2O95319 508 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 POP4O95707 220 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 POLR2MP0CAP2 368 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 TROVE2P10155 538 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 TARSP26639 723 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 SLC16A2P36021 539 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 PPP5CP53041 499 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ITGA8P53708 1063 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 CASP6P55212 293 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARPC4P59998 168 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 C1QTNF8P60827 252 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARF3P61204 181 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARF1P84077 181 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 HTD2P86397 168 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 DPYSQ14117 519 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 LASP1Q14847 261 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 RBBP5Q15291 538 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 CDC42EP5Q6NZY7 148 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 PGBD2Q6P3X8 592 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 DCLRE1AQ6PJP8 1040 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 CEP128Q6ZU80 1094 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 MARK2Q7KZI7 788 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 DPP9Q86TI2 863 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 VSIG10LQ86VR7 867 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 CPOQ8IVL8 374 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZFPM1Q8IX07 1006 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 SLC4A11Q8NBS3 891 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ADAM32Q8TC27 787 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZC3H10Q96K80 434 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARL5BQ96KC2 179 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 HS6ST2Q96MM7 605 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 BCL7BQ9BQE9 202 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 C8orf33Q9H7E9 229 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 JMJD4Q9H9V9 463 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 TRIM39Q9HCM9 518 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 LMCD1Q9NZU5 365 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF70Q9UC06 446 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 NDOR1Q9UHB4 597 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ABT1Q9ULW3 272 aaKnown RBP5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 INVSQ9Y283 1065 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 SIK3Q9Y2K2 1263 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 MED16Q9Y2X0 877 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 MRFAP1Q9Y605 127 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 MROH7-TTC4A0A0A0MT08 1334 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF532Q9HCE3 1301 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 A0A0U1RQK1 487 aa5.32□□□□□ -1.56
TRAPPC11-208ENST00000511955 A0A1W2PQH9 124 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms