RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CHTF18Q8WVB6 975 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 TMEM176AQ96HP8 235 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 MYL10Q9BUA6 226 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 POFUT1Q9H488 388 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 POLR3BQ9NW08 1133 aaPredicted RBP6.7□□□□□ -1.34
GYPB-212ENST00000511198 DBF4Q9UBU7 674 aaPredicted RBP6.7□□□□□ -1.34
GYPB-212ENST00000511198 OTOGLQ3ZCN5 2332 aa6.7□□□□□ -1.34
GYPB-212ENST00000511198 WDFY3Q8IZQ1 3526 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 A0A0A6YYJ9 748 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 SEPT4O43236 478 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 PDE8AO60658 829 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 FZD7O75084 574 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 CDC45O75419 566 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 ACRV1P26436 265 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 HIBADHP31937 336 aaKnown RBP6.69□□□□□ -1.34
GYPB-212ENST00000511198 CDK7P50613 346 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 SEPT7Q16181 437 aaKnown RBP6.69□□□□□ -1.34
GYPB-212ENST00000511198 PRAMEF19Q5SWL8 479 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 CLEC14AQ86T13 490 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 ZZZ3Q8IYH5 903 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 DCLK2Q8N568 766 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 C7orf31Q8N865 590 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 ANKRD53Q8N9V6 530 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 IL17DQ8TAD2 202 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 FAM151AQ8WW52 585 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 GCDHQ92947 438 aaPredicted RBP6.69□□□□□ -1.34
GYPB-212ENST00000511198 RPL10LQ96L21 214 aaKnown RBP6.69□□□□□ -1.34
GYPB-212ENST00000511198 WDR92Q96MX6 357 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 ANP32EQ9BTT0 268 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 TARS2Q9BW92 718 aaKnown RBP6.69□□□□□ -1.34
GYPB-212ENST00000511198 THG1LQ9NWX6 298 aaKnown RBP6.69□□□□□ -1.34
GYPB-212ENST00000511198 DNAI1Q9UI46 699 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 IGSF10Q6WRI0 2623 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 UMODL1Q5DID0 1318 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 LOC400499M0QZD8 3231 aa6.69□□□□□ -1.34
GYPB-212ENST00000511198 ANKRD17O75179 2603 aaKnown RBP6.68□□□□□ -1.34
GYPB-212ENST00000511198 A0A0A6YYK5 440 aaPredicted RBP6.68□□□□□ -1.34
GYPB-212ENST00000511198 HOXC6P09630 235 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 BPIFB4P59827 614 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 LRRC32Q14392 662 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 MFSD14BQ5SR56 506 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 KIAA1841Q6NSI8 718 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 TIGD7Q6NT04 549 aaPredicted RBP6.68□□□□□ -1.34
GYPB-212ENST00000511198 APOBEC3HQ6NTF7 200 aaKnown RBP6.68□□□□□ -1.34
GYPB-212ENST00000511198 C15orf52Q6ZUT6 534 aaKnown RBP6.68□□□□□ -1.34
GYPB-212ENST00000511198 KIAA0907Q7Z7F0 614 aaPredicted RBP6.68□□□□□ -1.34
GYPB-212ENST00000511198 C1orf210Q8IVY1 113 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 D2HGDHQ8N465 521 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 PLA2G15Q8NCC3 412 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 PLBD2Q8NHP8 589 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 CDC5LQ99459 802 aaKnown RBP6.68□□□□□ -1.34
GYPB-212ENST00000511198 FEZ1Q99689 392 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 HNRNPABQ99729 332 aaKnown RBP6.68□□□□□ -1.34
GYPB-212ENST00000511198 SOX7Q9BT81 388 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 MTG2Q9H4K7 406 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 FAM50BQ9Y247 325 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 SH3BP1Q9Y3L3 701 aa6.68□□□□□ -1.34
GYPB-212ENST00000511198 LOC285556D6RIA3 1793 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 A0A1W2PRX2 142 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 ELL2O00472 640 aaPredicted RBP6.67□□□□□ -1.34
GYPB-212ENST00000511198 OPHN1O60890 802 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 APOL3O95236 402 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 PGK1P00558 417 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 HNRNPLP14866 589 aaKnown RBP eCLIP6.67□□□□□ -1.341e-6■■■□□ 17.3
GYPB-212ENST00000511198 PRKAR2BP31323 418 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 GDF5P43026 501 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 DGCR2P98153 550 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 DMWDQ09019 674 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 TCP10Q12799 353 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 GAGE13Q4V321 117 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 SGMS1Q86VZ5 419 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 ZFPM1Q8IX07 1006 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 KCNG4Q8TDN1 519 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 SORCS2Q96PQ0 1159 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 ANKRD2Q9GZV1 360 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 GREM2Q9H772 168 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.67□□□□□ -1.34
GYPB-212ENST00000511198 PLAAQ9Y263 795 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 SMCHD1A6NHR9 2005 aa6.67□□□□□ -1.34
GYPB-212ENST00000511198 HECTD1Q9ULT8 2610 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 LCHNA4D1U4 455 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 CYR61O00622 381 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 MBTPS2O43462 519 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 HTATSF1O43719 755 aaKnown RBP6.66□□□□□ -1.34
GYPB-212ENST00000511198 TAF5LO75529 589 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 LMNAP02545 664 aaKnown RBP6.66□□□□□ -1.34
GYPB-212ENST00000511198 SLPIP03973 132 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 ARP10275 920 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 CD40P25942 277 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 HMGCS2P54868 508 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 CCL23P55773 120 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 SPP2Q13103 211 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 IGFL4Q6B9Z1 124 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 GAREM2Q75VX8 874 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 PPM1KQ8N3J5 372 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 PABPC5Q96DU9 382 aaKnown RBP6.66□□□□□ -1.34
GYPB-212ENST00000511198 RIPOR3Q96MK2 946 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 PANK3Q9H999 370 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 XPNPEP3Q9NQH7 507 aa6.66□□□□□ -1.34
GYPB-212ENST00000511198 HS3ST3A1Q9Y663 406 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms