RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CTAGE4Q8IX94 777 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 HPS3Q969F9 1004 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 MUC3BQ9H195 1237 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 TMX1Q9H3N1 280 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
LIN54-210ENST00000510877 INTS13Q9NVM9 706 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 DEC1Q9P2X7 70 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 DDX60Q8IY21 1712 aaKnown RBP13.17□□□□□ -0.3
LIN54-210ENST00000510877 HNRNPA1P09651 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
LIN54-210ENST00000510877 FUT2Q10981 343 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 SLC45A4Q5BKX6 768 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.17□□□□□ -0.3
LIN54-210ENST00000510877 PHF7Q9BWX1 381 aaPredicted RBP13.17□□□□□ -0.3
LIN54-210ENST00000510877 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 ITGB1P05556 798 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
LIN54-210ENST00000510877 TARBP2Q15633 366 aaKnown RBP13.17□□□□□ -0.3
LIN54-210ENST00000510877 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 GON4LQ3T8J9 2241 aa13.17□□□□□ -0.3
LIN54-210ENST00000510877 ATP5BP06576 529 aaKnown RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 CYLC1P35663 651 aaPredicted RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 MAP3K7CLP57077 242 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 MBTD1Q05BQ5 628 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 DNAJC24Q6P3W2 148 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 TSTD1Q8NFU3 115 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 SMARCD1Q96GM5 515 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 CGRRF1Q99675 332 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 TBC1D14Q9P2M4 693 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 VAV3Q9UKW4 847 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 C2CD2Q9Y426 696 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 ZNF623O75123 536 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 MYZAPP0CAP1 466 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 SEPT6Q14141 434 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 CDO1Q16878 200 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 MTMR9Q96QG7 549 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 SIPA1L3O60292 1781 aaPredicted RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 OR4Q2P0C623 313 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 MAPTP10636 758 aaKnown RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 TKTP29401 623 aaKnown RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 ARL2P36404 184 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 ATP5C1P36542 298 aaKnown RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 POLR2FP61218 127 aaKnown RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 EARS2Q5JPH6 523 aaKnown RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 FAM109BQ6ICB4 259 aaPredicted RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 PPP1R2P3Q6NXS1 205 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 ZNF557Q8N988 423 aaPredicted RBP13.16□□□□□ -0.3
LIN54-210ENST00000510877 EHBP1Q8NDI1 1231 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 ZNF852Q6ZMS4 543 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 TPGS1Q6ZTW0 290 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 MAP7D3Q8IWC1 876 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 HDDC3Q8N4P3 179 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 IGSF9Q9P2J2 1179 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 PCDHB8Q9UN66 801 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 HCFC2Q9Y5Z7 792 aa13.16□□□□□ -0.3
LIN54-210ENST00000510877 MBLAC1A4D2B0 266 aaPredicted RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 TFF2Q03403 129 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 UAP1L1Q3KQV9 507 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 IGSF22Q8N9C0 903 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 ACDQ96AP0 544 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 PABPC5Q96DU9 382 aaKnown RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 CHORDC1Q9UHD1 332 aaPredicted RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 OPLAHO14841 1288 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 DGKIO75912 1065 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 ACADSBP45954 432 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 PRR23CQ6ZRP0 262 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 RRAGAQ7L523 313 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 ENOSF1Q7L5Y1 443 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 ANKS4BQ8N8V4 417 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 PRRX2Q99811 253 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 NSRP1Q9H0G5 558 aaKnown RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 RAB20Q9NX57 234 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 CDH9Q9ULB4 789 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 KCNJ18B7U540 433 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 SCAMP3O14828 347 aaKnown RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 SLC2A3P11169 496 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 NCAM1P13591 858 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 GNA15P30679 374 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 SDC4P31431 198 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 CHKAP35790 457 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 CLK2P49760 499 aaKnown RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 KCNJ12Q14500 433 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 ANO6Q4KMQ2 910 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 FNDC3BQ53EP0 1204 aaKnown RBP13.15□□□□□ -0.3
LIN54-210ENST00000510877 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 SERPINA13PQ6UXR4 307 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 MAP4K3Q8IVH8 894 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 TTC25Q96NG3 672 aa13.15□□□□□ -0.3
LIN54-210ENST00000510877 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms