RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 MKNK1Q9BUB5 465 aa24.65■■□□□ 1.54
SNF8-209ENST00000510558 IL21Q9HBE4 155 aa24.65■■□□□ 1.54
SNF8-209ENST00000510558 LTB4R2Q9NPC1 389 aa24.65■■□□□ 1.54
SNF8-209ENST00000510558 HCRTO43612 131 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 PRPF40AO75400 957 aaKnown RBP24.64■■□□□ 1.54
SNF8-209ENST00000510558 MYL1P05976 194 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 PCSK1P29120 753 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 CDC25CP30307 473 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 NBL1P41271 181 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 PSMD2Q13200 908 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 LIMS2Q7Z4I7 341 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 MFSD6LQ8IWD5 586 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 GOLGA5Q8TBA6 731 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 GCNAQ96QF7 691 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 SCAND2PQ9GZW5 306 aaPredicted RBP24.64■■□□□ 1.54
SNF8-209ENST00000510558 GTF3C4Q9UKN8 822 aa24.64■■□□□ 1.54
SNF8-209ENST00000510558 MTF2Q9Y483 593 aaPredicted RBP24.64■■□□□ 1.54
SNF8-209ENST00000510558 PATJQ8NI35 1801 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 FAM237AA0A1B0GTK4 181 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 PROB1E7EW31 1015 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 EXOC3O60645 756 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 GPR15P49685 360 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 NDUFA8P51970 172 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 CYP4F8P98187 520 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 ARID3BQ8IVW6 561 aaPredicted RBP24.63■■□□□ 1.53
SNF8-209ENST00000510558 KBTBD7Q8WVZ9 684 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 RSPRY1Q96DX4 576 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 OSBPL6Q9BZF3 934 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 GZF1Q9H116 711 aaPredicted RBP24.63■■□□□ 1.53
SNF8-209ENST00000510558 ABCB6Q9NP58 842 aa24.63■■□□□ 1.53
SNF8-209ENST00000510558 ZNF638Q14966 1978 aaKnown RBP24.63■■□□□ 1.53
SNF8-209ENST00000510558 FAM170BA6NMN3 283 aa24.62■■□□□ 1.53
SNF8-209ENST00000510558 ZNF263O14978 683 aa24.62■■□□□ 1.53
SNF8-209ENST00000510558 CST3P01034 146 aaPredicted RBP24.62■■□□□ 1.53
SNF8-209ENST00000510558 TARSP26639 723 aaKnown RBP24.62■■□□□ 1.53
SNF8-209ENST00000510558 CCDC142Q17RM4 750 aa24.62■■□□□ 1.53
SNF8-209ENST00000510558 ZNF852Q6ZMS4 543 aa24.62■■□□□ 1.53
SNF8-209ENST00000510558 GPIHBP1Q8IV16 184 aa24.62■■□□□ 1.53
SNF8-209ENST00000510558 TASP1Q9H6P5 420 aa24.62■■□□□ 1.53
SNF8-209ENST00000510558 TRPV5Q9NQA5 729 aa24.62■■□□□ 1.53
SNF8-209ENST00000510558 CACNA1IQ9P0X4 2223 aa24.62■■□□□ 1.53
SNF8-209ENST00000510558 PTPRDP23468 1912 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 F5P12259 2224 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 GFRA3O60609 400 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 HMGA1P17096 107 aaKnown RBP24.61■■□□□ 1.53
SNF8-209ENST00000510558 CYP2F1P24903 491 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 SDHAF4Q5VUM1 108 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 FRMD5Q7Z6J6 570 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 YAF2Q8IY57 180 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 FSIP1Q8NA03 581 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 STKLD1Q8NE28 680 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 ZNF516Q92618 1163 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 MMS19Q96T76 1030 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 SYT15Q9BQS2 421 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 BCO2Q9BYV7 579 aa24.61■■□□□ 1.53
SNF8-209ENST00000510558 A0A1W2PQ27 194 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 A0A1W2PQ64 194 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 A0A1W2PQD8 194 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 MYBPHLA2RUH7 354 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 SHISA7A6NL88 538 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 RPN1P04843 607 aaKnown RBP24.6■■□□□ 1.53
SNF8-209ENST00000510558 PRR29P0C7W0 189 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 CSH1P0DML2 217 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 CSH2P0DML3 217 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 WARSP23381 471 aaKnown RBP24.6■■□□□ 1.53
SNF8-209ENST00000510558 RPL10AP62906 217 aaKnown RBP24.6■■□□□ 1.53
SNF8-209ENST00000510558 DDR2Q16832 855 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 CFAP221Q4G0U5 840 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 FAM171BQ6P995 826 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 SPATA2LQ8IUW3 424 aaPredicted RBP24.6■■□□□ 1.53
SNF8-209ENST00000510558 C1orf210Q8IVY1 113 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 PLEKHO2Q8TD55 490 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 FUBP3Q96I24 572 aaKnown RBP eCLIP24.6■■□□□ 1.53
SNF8-209ENST00000510558 NELL2Q99435 816 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 KCTD10Q9H3F6 313 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 DMAC2Q9NW81 257 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 CDH9Q9ULB4 789 aa24.6■■□□□ 1.53
SNF8-209ENST00000510558 MRPS17Q9Y2R5 130 aaKnown RBP24.6■■□□□ 1.53
SNF8-209ENST00000510558 GREB1Q4ZG55 1949 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 DPYSL4O14531 572 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 ATP2C2O75185 946 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 PRAMEF12O95522 483 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 F11P03951 625 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 LMO2P25791 158 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 WEE1P30291 646 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 CASP4P49662 377 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 NLRP12P59046 1061 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 PSMC1P62191 440 aaKnown RBP24.59■■□□□ 1.53
SNF8-209ENST00000510558 FCHO2Q0JRZ9 810 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 BECN1Q14457 450 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 TMEM150AQ86TG1 271 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 SLC9A9Q8IVB4 645 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 GOLPH3LQ9H4A5 285 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 GDPD2Q9HCC8 539 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 OBP2AQ9NY56 170 aa24.59■■□□□ 1.53
SNF8-209ENST00000510558 MAGED2Q9UNF1 606 aaPredicted RBP24.59■■□□□ 1.53
SNF8-209ENST00000510558 KIF26AQ9ULI4 1882 aaPredicted RBP24.58■■□□□ 1.53
SNF8-209ENST00000510558 ARNTLO00327 626 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 MAN2B1O00754 1011 aa24.58■■□□□ 1.53
SNF8-209ENST00000510558 CHADO15335 359 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms