RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 RARBP10826 455 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 RAB1AP62820 205 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 CXADRP78310 365 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 TCF15Q12870 199 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 LY6G5CQ5SRR4 150 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 OVCH2Q7RTZ1 564 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 AMER2Q8N7J2 671 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 PROKR1Q8TCW9 393 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 TMEM60Q9H2L4 133 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 C1orf112Q9NSG2 853 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 RNF181Q9P0P0 153 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 MYO5BQ9ULV0 1848 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 YTHDC2Q9H6S0 1430 aaKnown RBP8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 CGNL1Q0VF96 1302 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 ALKQ9UM73 1620 aa8.51□□□□□ -1.05
TRAPPC11-206ENST00000509857 ABCC11Q96J66 1382 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 E9PLN8 166 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 LPXNO60711 386 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 CTNND1O60716 968 aaKnown RBP8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 CDKL5O76039 1030 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 CHEK2O96017 543 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 ADH4P08319 380 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 POU6F2P78424 691 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 WDR43Q15061 677 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 CCDC157Q569K6 752 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 CC2D1BQ5T0F9 858 aaKnown RBP8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 KCNV1Q6PIU1 500 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 FOXR2Q6PJQ5 311 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 USP51Q70EK9 711 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 FMNL3Q8IVF7 1028 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 SH2D3CQ8N5H7 860 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 BRIX1Q8TDN6 353 aaKnown RBP8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 VKORC1Q9BQB6 163 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 VSX1Q9NZR4 365 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 CDYLQ9Y232 598 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 PTPRMP28827 1452 aa8.5□□□□□ -1.05
TRAPPC11-206ENST00000509857 TULP4Q9NRJ4 1543 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 TECPR2O15040 1411 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 GOLGA6CA6NDK9 693 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 GOLGA6BA6NDN3 693 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 MYADML2A6NDP7 307 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 SPDEFO95238 335 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 PARNO95453 639 aaKnown RBP8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 GOLGA6DP0CG33 693 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 GUCY1B3Q02153 619 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 CYP2A13Q16696 494 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 SPDYE7PQ495Y7 208 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 ANO6Q4KMQ2 910 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 CFAP52Q8N1V2 620 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 PDPRQ8NCN5 879 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 NACC2Q96BF6 587 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 ALOXE3Q9BYJ1 711 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 IMPG2Q9BZV3 1241 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 GOLGA6AQ9NYA3 693 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 PCDHA1Q9Y5I3 950 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 NOX1Q9Y5S8 564 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 HS3ST3A1Q9Y663 406 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 NLRP1Q9C000 1473 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
TRAPPC11-206ENST00000509857 FAM135BQ49AJ0 1406 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 RIMS2Q9UQ26 1411 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 A0A1W2PS29 197 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 CYR61O00622 381 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 AHSGP02765 367 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 GDF5P43026 501 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 PIGFQ07326 219 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 SCAPQ12770 1279 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 GFOD2Q3B7J2 385 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 Q6ZPA2 131 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 ULK2Q8IYT8 1036 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 SLC17A8Q8NDX2 589 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 TTC8Q8TAM2 541 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 LARP4BQ92615 738 aaKnown RBP8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 TNPO1Q92973 898 aaKnown RBP8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 GALNT9Q9HCQ5 603 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 CTTNBP2NLQ9P2B4 639 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 NEU2Q9Y3R4 380 aa8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 SETD1AO15047 1707 aaKnown RBP8.48□□□□□ -1.05
TRAPPC11-206ENST00000509857 NSD3Q9BZ95 1437 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 ZNF785A8K8V0 405 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 FAM227AF5H4B4 570 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 ZFPL1O95159 310 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 FOSP01100 380 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 KCNA2P16389 499 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 PSMC1P62191 440 aaKnown RBP8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 ZNF844Q08AG5 666 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 FGL2Q14314 439 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 GBX1Q14549 363 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 PTPAQ15257 358 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 DAAM2Q86T65 1068 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 KIAA0319LQ8IZA0 1049 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 DDX17Q92841 729 aaKnown RBP8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 RNF31Q96EP0 1072 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 SCAND2PQ9GZW5 306 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 SERHL2Q9H4I8 314 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 SLAMF7Q9NQ25 335 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 MTO1Q9Y2Z2 717 aaKnown RBP8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 ZNF521Q96K83 1311 aa8.47□□□□□ -1.05
TRAPPC11-206ENST00000509857 TNRQ92752 1358 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms