RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CSH2P0DML3 217 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 ATF6P18850 670 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 ATICP31939 592 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 CDR1P51861 262 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 STARD6P59095 220 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 TCF15Q12870 199 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 DPYDQ12882 1025 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 CCDC105Q8IYK2 499 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 GIPC2Q8TF65 315 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 TMEM174Q8WUU8 243 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 FUBP3Q96I24 572 aaKnown RBP eCLIP19.98■□□□□ 0.79
UBE3D-207ENST00000509102 ZSWIM3Q96MP5 696 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 HOOK1Q9UJC3 728 aaKnown RBP19.98■□□□□ 0.79
UBE3D-207ENST00000509102 GTF3C4Q9UKN8 822 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 CDH9Q9ULB4 789 aa19.98■□□□□ 0.79
UBE3D-207ENST00000509102 FCARP24071 287 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 GRM2Q14416 872 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 KCNB1Q14721 858 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 WDR72Q3MJ13 1102 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 GPR158Q5T848 1215 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 CEP135Q66GS9 1140 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 SYT15Q9BQS2 421 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 PLA2G2FQ9BZM2 168 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 KCTD10Q9H3F6 313 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 GOLPH3LQ9H4A5 285 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 ZNF334Q9HCZ1 680 aaPredicted RBP19.97■□□□□ 0.79
UBE3D-207ENST00000509102 RMND1Q9NWS8 449 aa19.97■□□□□ 0.79
UBE3D-207ENST00000509102 UXTQ9UBK9 157 aaPredicted RBP19.97■□□□□ 0.79
UBE3D-207ENST00000509102 MRPS17Q9Y2R5 130 aaKnown RBP19.97■□□□□ 0.79
UBE3D-207ENST00000509102 KANSL1LA0AUZ9 987 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 H0Y858 1186 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 ZNF263O14978 683 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 PI15O43692 258 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 STAU1O95793 577 aaKnown RBP19.96■□□□□ 0.79
UBE3D-207ENST00000509102 FAM163BP0C2L3 166 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 PRR29P0C7W0 189 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 WARSP23381 471 aaKnown RBP19.96■□□□□ 0.79
UBE3D-207ENST00000509102 RPL13P26373 211 aaKnown RBP19.96■□□□□ 0.79
UBE3D-207ENST00000509102 CFAP221Q4G0U5 840 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 GAREM2Q75VX8 874 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 OSTM1Q86WC4 334 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 MFSD6LQ8IWD5 586 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 DTWD2Q8NBA8 298 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 PJA1Q8NG27 643 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 PARD3BQ8TEW8 1205 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 NELL2Q99435 816 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 TASP1Q9H6P5 420 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 TMLHEQ9NVH6 421 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 DMAC2Q9NW81 257 aa19.96■□□□□ 0.79
UBE3D-207ENST00000509102 HEPACAM2A8MVW5 462 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 NCAM2O15394 837 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 TACC1O75410 805 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 CST3P01034 146 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-207ENST00000509102 P4HA1P13674 534 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 GDI1P31150 447 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 GNL1P36915 607 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-207ENST00000509102 VIPR2P41587 438 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 UBXN2BQ14CS0 331 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 SCARA3Q6AZY7 606 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 VITQ6UXI7 678 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 ZNF852Q6ZMS4 543 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 TPRG1Q6ZUI0 275 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 LIMS2Q7Z4I7 341 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 ARID3BQ8IVW6 561 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-207ENST00000509102 GUF1Q8N442 669 aaKnown RBP19.95■□□□□ 0.78
UBE3D-207ENST00000509102 OR6B3Q8NGW1 331 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 KBTBD7Q8WVZ9 684 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 MRPS31Q92665 395 aaKnown RBP19.95■□□□□ 0.78
UBE3D-207ENST00000509102 MAGEC2Q9UBF1 373 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-207ENST00000509102 NXF1Q9UBU9 619 aaKnown RBP19.95■□□□□ 0.78
UBE3D-207ENST00000509102 MAGED2Q9UNF1 606 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-207ENST00000509102 TRAF3IP3Q9Y228 551 aa19.95■□□□□ 0.78
UBE3D-207ENST00000509102 LRRIQ3A6PVS8 624 aaPredicted RBP19.94■□□□□ 0.78
UBE3D-207ENST00000509102 MAN2B1O00754 1011 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 PDGFRBP09619 1106 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 KRT13P13646 458 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 NR2F2P24468 414 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 CYP2F1P24903 491 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 DDX6P26196 483 aaKnown RBP eCLIP19.94■□□□□ 0.78
UBE3D-207ENST00000509102 CASP4P49662 377 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 MYL6P60660 151 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 NCOA4Q13772 614 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 ZNF699Q32M78 642 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 POTEHQ6S545 545 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 SCN4BQ8IWT1 228 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 TMC2Q8TDI7 906 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 CSGALNACT1Q8TDX6 532 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 ZNF516Q92618 1163 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 BCO2Q9BYV7 579 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 OSBPL6Q9BZF3 934 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 FOXQ1Q9C009 403 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 TRPV5Q9NQA5 729 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 HEBP1Q9NRV9 189 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 EHD2Q9NZN4 543 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 MAPK8IP1Q9UQF2 711 aa19.94■□□□□ 0.78
UBE3D-207ENST00000509102 MYBPHLA2RUH7 354 aa19.93■□□□□ 0.78
UBE3D-207ENST00000509102 MAPK13O15264 365 aa19.93■□□□□ 0.78
UBE3D-207ENST00000509102 SMC2O95347 1197 aa19.93■□□□□ 0.78
UBE3D-207ENST00000509102 DCNP07585 359 aaKnown RBP19.93■□□□□ 0.78
UBE3D-207ENST00000509102 TRIM21P19474 475 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms