RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 FBRSL1Q9HCM7 1045 aaKnown RBP17.28■□□□□ 0.36
CXCL1-202ENST00000509101 TDP1Q9NUW8 608 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 ODF2LQ9ULJ1 636 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 BAHCC1Q9P281 2608 aa17.28■□□□□ 0.36
CXCL1-202ENST00000509101 ABCA7Q8IZY2 2146 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 ZZEF1O43149 2961 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 DCLK1O15075 740 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 HMGA1P17096 107 aaKnown RBP17.27■□□□□ 0.36
CXCL1-202ENST00000509101 DRD1P21728 446 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 DDX6P26196 483 aaKnown RBP eCLIP17.27■□□□□ 0.36
CXCL1-202ENST00000509101 GPR15P49685 360 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 ACOT2P49753 483 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 TAF6P49848 677 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 NOVA1P51513 510 aaKnown RBP17.27■□□□□ 0.36
CXCL1-202ENST00000509101 CREB5Q02930 508 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 DHX8Q14562 1220 aaKnown RBP17.27■□□□□ 0.36
CXCL1-202ENST00000509101 WSCD1Q658N2 575 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 CC2D1AQ6P1N0 951 aaPredicted RBP17.27■□□□□ 0.36
CXCL1-202ENST00000509101 GPBP1Q86WP2 473 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 MYCT1Q8N699 235 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 TTC16Q8NEE8 873 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 KCNN1Q92952 543 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 P2RY13Q9BPV8 354 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 MAGED2Q9UNF1 606 aaPredicted RBP17.27■□□□□ 0.36
CXCL1-202ENST00000509101 DERAQ9Y315 318 aa17.27■□□□□ 0.36
CXCL1-202ENST00000509101 PTPRDP23468 1912 aa17.26■□□□□ 0.35
CXCL1-202ENST00000509101 FAM13AO94988 1023 aa17.26■□□□□ 0.35
CXCL1-202ENST00000509101 PROS1P07225 676 aa17.26■□□□□ 0.35
CXCL1-202ENST00000509101 GJA4P35212 333 aa17.26■□□□□ 0.35
CXCL1-202ENST00000509101 GALK1P51570 392 aa17.26■□□□□ 0.35
CXCL1-202ENST00000509101 AMPD2Q01433 879 aa17.26■□□□□ 0.35
CXCL1-202ENST00000509101 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
CXCL1-202ENST00000509101 DCP1BQ8IZD4 617 aaKnown RBP17.26■□□□□ 0.35
CXCL1-202ENST00000509101 KCTD17Q8N5Z5 321 aa17.26■□□□□ 0.35
CXCL1-202ENST00000509101 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
CXCL1-202ENST00000509101 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
CXCL1-202ENST00000509101 PI4K2AQ9BTU6 479 aa17.26■□□□□ 0.35
CXCL1-202ENST00000509101 C1QTNF9BB2RNN3 333 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 TISP43B9A030 160 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 ANKRD63C9JTQ0 380 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 GIPC1O14908 333 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 TADA3O75528 432 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 RHOBTB1O94844 696 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 APBB3O95704 486 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 CAVIN2O95810 425 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 C1QTNF9P0C862 333 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 GBP1P32455 592 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 ZNF252P-AS1Q0IIN9 211 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 SMARCB1Q12824 385 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 PSMD2Q13200 908 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 DMC1Q14565 340 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 MTF1Q14872 753 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 PDGFRLQ15198 375 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 FBXO43Q4G163 708 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 SDHAF4Q5VUM1 108 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 MCTP1Q6DN14 999 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 UNQ6494/PRO21346Q6UXR6 183 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 CPA6Q8N4T0 437 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 LRRC15Q8TF66 581 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 EZH1Q92800 747 aaPredicted RBP17.25■□□□□ 0.35
CXCL1-202ENST00000509101 ZHX3Q9H4I2 956 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 PARVGQ9HBI0 331 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 SH2B1Q9NRF2 756 aaPredicted RBP17.25■□□□□ 0.35
CXCL1-202ENST00000509101 TMLHEQ9NVH6 421 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 DPP3Q9NY33 737 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 C2CD2Q9Y426 696 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 PCDHB5Q9Y5E4 795 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 AKAP13Q12802 2813 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 SPEGQ15772 3267 aa17.25■□□□□ 0.35
CXCL1-202ENST00000509101 ZFYVE26Q68DK2 2539 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 TNRC6BQ9UPQ9 1833 aaKnown RBP17.24■□□□□ 0.35
CXCL1-202ENST00000509101 LNP1A1A4G5 178 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 BCLAF3A2AJT9 711 aaKnown RBP17.24■□□□□ 0.35
CXCL1-202ENST00000509101 C4orf47A7E2U8 309 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 PRPF40AO75400 957 aaKnown RBP17.24■□□□□ 0.35
CXCL1-202ENST00000509101 SEC24BO95487 1268 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 CSH1P0DML2 217 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 CSH2P0DML3 217 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 DGKEP52429 567 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 ZNF131P52739 623 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 TSPY1Q01534 308 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 FOXC1Q12948 553 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 SV2CQ496J9 727 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 ADALQ6DHV7 355 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 SYT13Q7L8C5 426 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 MON1AQ86VX9 555 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 EFCAB13Q8IY85 973 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 CD101Q93033 1021 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 EXOC4Q96A65 974 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 ACDQ96AP0 544 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 CCSER1Q9C0I3 900 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 ASB7Q9H672 318 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 ECT2Q9H8V3 914 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 TRPC7Q9HCX4 862 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 INVSQ9Y283 1065 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 WNT6Q9Y6F9 365 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 WDFY3Q8IZQ1 3526 aa17.24■□□□□ 0.35
CXCL1-202ENST00000509101 ATRXP46100 2492 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms