RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 CA12O43570 354 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 TMEM191BP0C7N4 346 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 UNGP13051 313 aaPredicted RBP11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 ARF4P18085 180 aaPredicted RBP11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 CD58P19256 250 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 CYP2B6P20813 491 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 FGFR4P22455 802 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 TBXAS1P24557 533 aaPredicted RBP11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 GNA15P30679 374 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 CENPCQ03188 943 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 SREBF2Q12772 1141 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 KIZQ2M2Z5 673 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 LLGL2Q6P1M3 1020 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 TLK2Q86UE8 772 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 KIAA0319LQ8IZA0 1049 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 RBBP8NLQ8NC74 664 aaPredicted RBP11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 SNF8Q96H20 258 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 A6NJR5 290 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 NFICP08651 508 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 ZNF865P0CJ78 1059 aaPredicted RBP11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 STAG3L1P0CL83 205 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 TM4SF4P48230 202 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 MARCKSL1P49006 195 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 CTCFP49711 727 aaPredicted RBP11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 AP3M2P53677 418 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 INHBEP58166 350 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 IFI35P80217 286 aaPredicted RBP11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 POU5F1BQ06416 359 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 PTK6Q13882 451 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 CNGA2Q16280 664 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 FAM187BQ17R55 369 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 ZNF394Q53GI3 561 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 SGO2Q562F6 1265 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 C17orf99Q6UX52 265 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 SCARA5Q6ZMJ2 495 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 PHLDB2Q86SQ0 1253 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 ZDHHC14Q8IZN3 488 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 ATL2Q8NHH9 583 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 CCDC77Q9BR77 488 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 FAM49AQ9H0Q0 323 aaPredicted RBP11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 XYLT2Q9H1B5 865 aa11.65□□□□□ -0.54
SH3RF1-203ENST00000508685 ANK1P16157 1881 aa11.65□□□□□ -0.55
SH3RF1-203ENST00000508685 NDC80O14777 642 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 MGRN1O60291 552 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 B4GALT4O60513 344 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 TSPAN1O60635 241 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 F2P00734 622 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 VIMP08670 466 aaKnown RBP11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 RIPK1Q13546 671 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 PREPLQ4J6C6 727 aaPredicted RBP11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 WLSQ5T9L3 541 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 AADACL2Q6P093 401 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 LRRC34Q8IZ02 419 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 TRAIPQ9BWF2 469 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 TRIM7Q9C029 511 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 RPF1Q9H9Y2 349 aaKnown RBP11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 SLC12A4Q9UP95 1085 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 ACTL7BQ9Y614 415 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 A0A1B0GUA9 196 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 LACTBL1A8MY62 500 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 O00370 1275 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 SUN1O94901 812 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 TTC4O95801 387 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 KRT19P08727 400 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 WEE2P0C1S8 567 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 SMIM10L2AP0DMW4 78 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 SMIM10L2BP0DMW5 78 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 ASPAP45381 313 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 LMNB2Q03252 620 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 KRT17Q04695 432 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 CRHR2Q13324 411 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 TRPC3Q13507 836 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 HIC1Q14526 733 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 ZNF699Q32M78 642 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 JADE1Q6IE81 842 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 RHBDF2Q6PJF5 856 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 TRIM72Q6ZMU5 477 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 TRPM8Q7Z2W7 1104 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 RELL1Q8IUW5 271 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 UBR7Q8N806 425 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 CCHCR1Q8TD31 782 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 DYDC1Q8WWB3 177 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 USP6NLQ92738 828 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 PRMT1Q99873 361 aaKnown RBP11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 NIF3L1Q9GZT8 377 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 CISHQ9NSE2 258 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 RNF186Q9NXI6 227 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 SIX4Q9UIU6 781 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 CNTN6Q9UQ52 1028 aa11.64□□□□□ -0.55
SH3RF1-203ENST00000508685 THAP12O43422 761 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 TNNC2P02585 160 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 CYP1A1P04798 512 aaPredicted RBP11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 MCF2P10911 925 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 EZRP15311 586 aaKnown RBP11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 RRM1P23921 792 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 CTGFP29279 349 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 CETN2P41208 172 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms