RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 SPATS2Q86XZ4 545 aaKnown RBP10.08□□□□□ -0.8
PHF3-208ENST00000506783 MREGQ8N565 214 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 FEZF2Q8TBJ5 459 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 ADAM32Q8TC27 787 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 SHC3Q92529 594 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 CFAP57Q96MR6 1250 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 RIT2Q99578 217 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 ADPGKQ9BRR6 497 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 MROH7Q68CQ1 1323 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 hCG_2014768A0A024R1R8 64 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 NEMP1O14524 444 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 NPTXRO95502 500 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 MT-CO1P00395 513 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 ITIH2P19823 946 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
PHF3-208ENST00000506783 CFAP157Q5JU67 520 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 TMCO4Q5TGY1 634 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 NXNQ6DKJ4 435 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 FBXO16Q8IX29 292 aaPredicted RBP10.08□□□□□ -0.8
PHF3-208ENST00000506783 UNC5BQ8IZJ1 945 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 RASGEF1CQ8N431 466 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 GMCL1P1Q8NEA9 526 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 OR6B3Q8NGW1 331 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 NLRP7Q8WX94 980 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 VTI1AQ96AJ9 217 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 BORCS6Q96GS4 357 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 SENP7Q9BQF6 1050 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 B3GNT5Q9BYG0 378 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 DHX35Q9H5Z1 703 aaKnown RBP10.08□□□□□ -0.8
PHF3-208ENST00000506783 ZNF541Q9H0D2 1346 aa10.08□□□□□ -0.8
PHF3-208ENST00000506783 PDGFRAP16234 1089 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 SERPINB3P29508 390 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 SLC8A1P32418 973 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 MMP13P45452 471 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 PDE1BQ01064 536 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 KRT76Q01546 638 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 NME3Q13232 169 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 PPP2R5EQ16537 467 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 DENND1BQ6P3S1 775 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 ECHDC2Q86YB7 292 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 UNC45BQ8IWX7 931 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 PAF1Q8N7H5 531 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 TMEM35BQ8NCS4 154 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 ATXN2LQ8WWM7 1075 aaKnown RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 PGBD4Q96DM1 585 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 PRR11Q96HE9 360 aaPredicted RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 TRIM6Q9C030 488 aaPredicted RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 ADAM7Q9H2U9 754 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 RRAGCQ9HB90 399 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 KIAA1586Q9HCI6 787 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 A1CFQ9NQ94 594 aaKnown RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 TXNDC16Q9P2K2 825 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 N4BP2Q86UW6 1770 aaPredicted RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 FAM237BA0A1B0GVD1 139 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 SMIM24O75264 130 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 SLC4A1P02730 911 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 TROVE2P10155 538 aaKnown RBP eCLIP10.07□□□□□ -0.8
PHF3-208ENST00000506783 TCF7P36402 384 aaPredicted RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 NCALDP61601 193 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 PAN2Q504Q3 1202 aaKnown RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 CCDC62Q6P9F0 684 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 VSTM1Q6UX27 236 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 MMP19Q99542 508 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 THTPAQ9BU02 230 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 AS3MTQ9HBK9 375 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 TSR3Q9UJK0 312 aaKnown RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 SNX9Q9Y5X1 595 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 MCF2LO15068 1137 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 DHX15O43143 795 aaKnown RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 UGT1A9O60656 530 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 ENTPD3O75355 529 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 RASSF2P50749 326 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 WDR4P57081 412 aaKnown RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 MAPK6Q16659 721 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 RFWD2Q8NHY2 731 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 TFAP2BQ92481 460 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 VPS11Q9H270 941 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 UGT1A7Q9HAW7 530 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 UGT1A10Q9HAW8 530 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 UGT1A8Q9HAW9 530 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 UVRAGQ9P2Y5 699 aa10.07□□□□□ -0.8
PHF3-208ENST00000506783 NKX1-2Q9UD57 310 aaPredicted RBP10.07□□□□□ -0.8
PHF3-208ENST00000506783 A0A0A6YYK5 440 aaPredicted RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 VWA5AO00534 786 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 RGL2O15211 777 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 MAPK13O15264 365 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 PROSCO94903 275 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 TNNC2P02585 160 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 SERPINB6P35237 376 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ELK3P41970 407 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 IREB2P48200 963 aaKnown RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 OLIG2Q13516 323 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 EEF1DP3Q658K8 133 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 CD302Q8IX05 232 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 XPNPEP1Q9NQW7 623 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 PARVAQ9NVD7 372 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 CPSF2Q9P2I0 782 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms