RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ALG13Q9NP73 1137 aaKnown RBP3.61□□□□□ -1.83
GYPB-207ENST00000506679 COL20A1Q9P218 1284 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 ING1Q9UK53 422 aaPredicted RBP3.61□□□□□ -1.83
GYPB-207ENST00000506679 TMX2Q9Y320 296 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 PCDHGB6Q9Y5F9 930 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 RAD54BQ9Y620 910 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 A0A0B4J269 797 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 WDR27A2RRH5 827 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 MBD3L4A6NDZ8 208 aaPredicted RBP3.6□□□□□ -1.83
GYPB-207ENST00000506679 MBD3L3A6NE82 208 aaPredicted RBP3.6□□□□□ -1.83
GYPB-207ENST00000506679 TMEM191CA6NGB0 347 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 CAND2O75155 1236 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 FSHBP01225 129 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 CYP2C9P11712 490 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 BRAFP15056 766 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 PPP3CBP16298 524 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 ITGALP20701 1170 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 PROZP22891 400 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 PPIFP30405 207 aaKnown RBP3.6□□□□□ -1.83
GYPB-207ENST00000506679 MPLP40238 635 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 AVPR1BP47901 424 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 HNRNPMP52272 730 aaKnown RBP eCLIP3.6□□□□□ -1.83
GYPB-207ENST00000506679 COL10A1Q03692 680 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 DPTQ07507 201 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 FOXI1Q12951 378 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 TUBB3Q13509 450 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 RAB32Q13637 225 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 IQCB1Q15051 598 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 SF3B3Q15393 1217 aaKnown RBP3.6□□□□□ -1.83
GYPB-207ENST00000506679 SAFBQ15424 915 aaKnown RBP eCLIP3.6□□□□□ -1.83
GYPB-207ENST00000506679 PREPLQ4J6C6 727 aaPredicted RBP3.6□□□□□ -1.83
GYPB-207ENST00000506679 RBM20Q5T481 1227 aaKnown RBP3.6□□□□□ -1.83
GYPB-207ENST00000506679 PJA1Q8NG27 643 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 OR56A3Q8NH54 315 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 SLC30A5Q8TAD4 765 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 FBXO41Q8TF61 875 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 LPIN2Q92539 896 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 PHKBQ93100 1093 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 PTCD3Q96EY7 689 aaKnown RBP3.6□□□□□ -1.83
GYPB-207ENST00000506679 CCDC136Q96JN2 1154 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 MOGAT1Q96PD6 335 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 NUP62CLQ9H1M0 184 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 ARNT2Q9HBZ2 717 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 KIAA1586Q9HCI6 787 aa3.6□□□□□ -1.83
GYPB-207ENST00000506679 AFF4Q9UHB7 1163 aaKnown RBP3.6□□□□□ -1.83
GYPB-207ENST00000506679 ANO9A1A5B4 782 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 TMEM233B4DJY2 109 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 APAF1O14727 1248 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 TRIAP1O43715 76 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 TBC1D4O60343 1298 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 ESRRBO95718 433 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 IL1R1P14778 569 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 KLRC1P26715 233 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 ADRA1BP35368 520 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 FOLR3P41439 243 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 TM4SF4P48230 202 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 LILRA4P59901 499 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 HTRA4P83105 476 aaPredicted RBP3.59□□□□□ -1.83
GYPB-207ENST00000506679 ITIH3Q06033 890 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 FHL2Q14192 279 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 ZIK1Q3SY52 487 aaPredicted RBP3.59□□□□□ -1.83
GYPB-207ENST00000506679 COBLL1Q53SF7 1204 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 HECTD2Q5U5R9 776 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 VPS53Q5VIR6 699 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 DCAF12L1Q5VU92 463 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 LAIR1Q6GTX8 287 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 TMEM108Q6UXF1 575 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 Q6ZNX1 250 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 LCORLQ8N3X6 602 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 SLC15A4Q8N697 577 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 MYCBPAPQ8TBZ2 947 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 ZC3H10Q96K80 434 aaKnown RBP3.59□□□□□ -1.83
GYPB-207ENST00000506679 SORCS2Q96PQ0 1159 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 NELL2Q99435 816 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 AIFM2Q9BRQ8 373 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 PTDSS2Q9BVG9 487 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 AMBRA1Q9C0C7 1298 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 TTYH3Q9C0H2 523 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 CASS4Q9NQ75 786 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 A1CFQ9NQ94 594 aaKnown RBP3.59□□□□□ -1.83
GYPB-207ENST00000506679 XPNPEP3Q9NQH7 507 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 TESQ9UGI8 421 aaKnown RBP3.59□□□□□ -1.83
GYPB-207ENST00000506679 PACSIN3Q9UKS6 424 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 OGDHLQ9ULD0 1010 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 SSX2IPQ9Y2D8 614 aa3.59□□□□□ -1.83
GYPB-207ENST00000506679 POLR2AP24928 1970 aaKnown RBP3.59□□□□□ -1.83
GYPB-207ENST00000506679 VWC2LB2RUY7 222 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 F5H697 171 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 F8W8V4 182 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 PYCARD-AS1I3L0S3 204 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 FOXN3O00409 490 aaPredicted RBP3.58□□□□□ -1.84
GYPB-207ENST00000506679 PMM2O15305 246 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 MPPED1O15442 326 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 MYL1P05976 194 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 CSF1RP07333 972 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 XRCC6P12956 609 aaKnown RBP eCLIP3.58□□□□□ -1.84
GYPB-207ENST00000506679 CD6P30203 668 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 LRPAP1P30533 357 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 PIK3CBP42338 1070 aa3.58□□□□□ -1.84
GYPB-207ENST00000506679 PXNP49023 591 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms