RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ITFG1Q8TB96 612 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 SPPL2BQ8TCT7 592 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 SEPT5Q99719 369 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 BCO2Q9BYV7 579 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 SNX25Q9H3E2 840 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 PCDHB5Q9Y5E4 795 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 PTPRDP23468 1912 aa19.5■□□□□ 0.71
PDLIM7-216ENST00000506537 HAPLN1P10915 354 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 FSHRP23945 695 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 NFE2Q16621 373 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 MGAT5BQ3V5L5 792 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 PABPC1LQ4VXU2 614 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 CCDC183Q5T5S1 534 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 OTOP3Q7RTS5 596 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 IRF2BP1Q8IU81 584 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 HS6ST3Q8IZP7 471 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 MYLPFQ96A32 169 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 CORO1BQ9BR76 489 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 IMPG2Q9BZV3 1241 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 RAB20Q9NX57 234 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 TMEM63CQ9P1W3 806 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 HMGXB4Q9UGU5 601 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 COQ4Q9Y3A0 265 aa19.49■□□□□ 0.71
PDLIM7-216ENST00000506537 GNA14O95837 355 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 P4HA1P13674 534 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 PTPN2P17706 415 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 CYP2F1P24903 491 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 CCR2P41597 374 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 FMO5P49326 533 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 GPR15P49685 360 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 PLD1Q13393 1074 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 MDH1BQ5I0G3 518 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 PRSS36Q5K4E3 855 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 POTEHQ6S545 545 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 TMC8Q8IU68 726 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 ZDHHC14Q8IZN3 488 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 TCEAL4Q96EI5 215 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 LRRC3Q9BY71 257 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 NIF3L1Q9GZT8 377 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 ABCB6Q9NP58 842 aa19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 AVENQ9NQS1 362 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-216ENST00000506537 A8MXQ7 604 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 ERCC5P28715 1186 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 GBP2P32456 591 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 ALDH1A3P47895 512 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 TUFMP49411 452 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 EPHB3P54753 998 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 EPHA5P54756 1037 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 CFAP221Q4G0U5 840 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 ELMOD1Q8N336 334 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 STKLD1Q8NE28 680 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 MYCBPAPQ8TBZ2 947 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 ACSF2Q96CM8 615 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 PCED1BQ96HM7 432 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 CNOT6LQ96LI5 555 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 ZNF512Q96ME7 567 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 EPS15L1Q9UBC2 864 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 MUTYHQ9UIF7 546 aa19.47■□□□□ 0.71
PDLIM7-216ENST00000506537 MOSPD3O75425 235 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 FGFR1OPO95684 399 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 CEBPBP17676 345 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 PTPN1P18031 435 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 INCA1Q0VD86 236 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 ORC1Q13415 861 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 SPATA2LQ8IUW3 424 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 NPAS3Q8IXF0 933 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 B3GALNT2Q8NCR0 500 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 GPR152Q8TDT2 470 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 ING5Q8WYH8 240 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 FGF13Q92913 245 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 TATDN2Q93075 761 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 PSMG2Q969U7 264 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 FUBP3Q96I24 572 aaKnown RBP eCLIP19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 TWNKQ96RR1 684 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 ARID3AQ99856 593 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 ZNF334Q9HCZ1 680 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 RAPGEFL1Q9UHV5 662 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 DACH1Q9UI36 760 aa19.46■□□□□ 0.71
PDLIM7-216ENST00000506537 PMM2O15305 246 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 ASGR2P07307 311 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 CCDC192P0DO97 292 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 NDST1P52848 882 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 KCNH2Q12809 1159 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 MAPRE1Q15691 268 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 DDR2Q16832 855 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 SDHAF4Q5VUM1 108 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 IQCEQ6IPM2 695 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 C4orf50Q6ZRC1 276 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 DNAJB7Q7Z6W7 309 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 PLCD3Q8N3E9 789 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 CCDC150Q8NCX0 1101 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 GIPC2Q8TF65 315 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 CYP3A43Q9HB55 503 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 ASAH2Q9NR71 780 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 LIMD1Q9UGP4 676 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 CDH7Q9ULB5 785 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 MRPS23Q9Y3D9 190 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 ASB3Q9Y575 518 aa19.45■□□□□ 0.7
PDLIM7-216ENST00000506537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms