RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CCDC127Q96BQ5 260 aa17.98■□□□□ 0.47
PDLIM7-215ENST00000506161 CGRRF1Q99675 332 aa17.98■□□□□ 0.47
PDLIM7-215ENST00000506161 SMG9Q9H0W8 520 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-215ENST00000506161 KCTD10Q9H3F6 313 aa17.98■□□□□ 0.47
PDLIM7-215ENST00000506161 TRPV4Q9HBA0 871 aa17.98■□□□□ 0.47
PDLIM7-215ENST00000506161 ZFP14Q9HCL3 533 aa17.98■□□□□ 0.47
PDLIM7-215ENST00000506161 HEPACAM2A8MVW5 462 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 KIAA0391O15091 583 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 TADA3O75528 432 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 LMNAP02545 664 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 DLATP10515 647 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 CYP2F1P24903 491 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 PNPLA4P41247 253 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 PSMC1P62191 440 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 KRT85P78386 507 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 PUM1Q14671 1186 aaKnown RBP eCLIP17.97■□□□□ 0.473e-7■□□□□ 10.6
PDLIM7-215ENST00000506161 KNOP1Q1ED39 458 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 WDR44Q5JSH3 913 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 TPRG1Q6ZUI0 275 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 WDR49Q8IV35 697 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 KIAA2013Q8IYS2 634 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 CEP57L1Q8IYX8 460 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 ZNF687Q8N1G0 1237 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 XXYLT1Q8NBI6 393 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 HPDLQ96IR7 371 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 ANKRD36BP1Q96IX9 119 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 MRPL45Q9BRJ2 306 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 SEMA4AQ9H3S1 761 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 LTB4R2Q9NPC1 389 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 CRTAC1Q9NQ79 661 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 HSFX1Q9UBD0 423 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 SIT1Q9Y3P8 196 aa17.97■□□□□ 0.47
PDLIM7-215ENST00000506161 KANSL1LA0AUZ9 987 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 HUS1O60921 280 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 GDI1P31150 447 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 DLG4P78352 724 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 DDR2Q16832 855 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 ARID3BQ8IVW6 561 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 C12orf56Q8IXR9 622 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 LEMD2Q8NC56 503 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 SPPL2BQ8TCT7 592 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 ZFYVE19Q96K21 471 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 ACBD6Q9BR61 282 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 ATXN3LQ9H3M9 355 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 DMAC2Q9NW81 257 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 MYO16Q9Y6X6 1858 aa17.96■□□□□ 0.47
PDLIM7-215ENST00000506161 PRPF40AO75400 957 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 TNNC2P02585 160 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 F11P03951 625 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 SOX9P48436 509 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 MYL6P60660 151 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 DPYDQ12882 1025 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 UBXN2BQ14CS0 331 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 DUOXA2Q1HG44 320 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 GPR158Q5T848 1215 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 TOP6BLQ8N6T0 577 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 FAM200AQ8TCP9 573 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 SLC46A2Q9BY10 475 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 XYLT2Q9H1B5 865 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 SLITRK6Q9H5Y7 841 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 EXOC1Q9NV70 894 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 TMEM30AQ9NV96 361 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 ASB3Q9Y575 518 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 PCDHB5Q9Y5E4 795 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 CACNA1BQ00975 2339 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 F5P12259 2224 aa17.95■□□□□ 0.46
PDLIM7-215ENST00000506161 MYH10P35580 1976 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 LRRIQ3A6PVS8 624 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 VNN1O95497 513 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 RPN1P04843 607 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 PSMC3P17980 439 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 TNNI1P19237 187 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 SYKP43405 635 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 TUFMP49411 452 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 PRKCQQ04759 706 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 SURF1Q15526 300 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 C1orf220Q5T0J3 134 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 TDRD10Q5VZ19 366 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 FAM171BQ6P995 826 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 KRBA2Q6ZNG9 492 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 MFSD6LQ8IWD5 586 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 DCP1BQ8IZD4 617 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 TMEM86AQ8N2M4 240 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 CNTNAP3BQ96NU0 1288 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 TRMT61BQ9BVS5 477 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 CNTNAP3Q9BZ76 1288 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 DPEP3Q9H4B8 488 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 BRD9Q9H8M2 597 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 KIAA1586Q9HCI6 787 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 ATG2BQ96BY7 2078 aa17.94■□□□□ 0.46
PDLIM7-215ENST00000506161 ZNF292O60281 2723 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 KIAA1549LQ6ZVL6 1849 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 FAM170BA6NMN3 283 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 PDGFRBP09619 1106 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 RFX1P22670 979 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 CACNA2D1P54289 1103 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 NLRP12P59046 1061 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 TSPY1Q01534 308 aa17.93■□□□□ 0.46
PDLIM7-215ENST00000506161 HS2ST1Q7LGA3 356 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms